Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0110 ATGACGCTTTCAACTGGAAACAGCAGCAAGATCCGACGCATTGTTCGAATCCGGCAAATGGTCTTCCGGTGGCGCAACAAAGCGCGTGTCACCGCCACTCAAGTGCCATCAGACGTTCCTGCAGGTTACATAGCAGTGTGTGTGGGACCTACAAGGAGCAGGTTTATCATACGCGCCACCTCTCTGAACCACCCTATATTTGTAAAGCTTTTGGCGGAAGCGGAAGAAGAATACGGTTTCTGTAACAATGGCCCACTCGCCGTACCTTGCGATGAGGAATATTTCAGAGAAATCCTTCGTGTCATAGCGCAACCGAAATGTTTCACCAGTATTGAAGATTTCCAGAAAAGTTGCCACGTGGATGTGCGAAGCAGAGAATCCTGGCCGTTGCTTCGAGACGACCCTATTTACTAA 414 0.4928 MTLSTGNSSKIRRIVRIRQMVFRWRNKARVTATQVPSDVPAGYIAVCVGPTRSRFIIRATSLNHPIFVKLLAEAEEEYGFCNNGPLAVPCDEEYFREILRVIAQPKCFTSIEDFQKSCHVDVRSRESWPLLRDDPIY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0110 137 PANTHER SMALL AUXIN-UP RNA-RELATED 6 124 - -
Lal2g0110 137 Pfam Auxin responsive protein 17 101 IPR003676 GO:0009733
Lal2g0110 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 124 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0110 Lal-Chr2 674109 674522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0110 6 131 Calmodulin-binding Proteins AT4G34750 45.000 3.68e-37 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0110 K14488 - gmx:100790866 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0110 2 674109 674522 Lal2g0110 2 674109 674522 ECH
Lal1g0187 1 1132458 1133048 Lal2g0110 2 674109 674522 LSH