Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0108 ATGGCCAATAGAAAATCAAACAAGTTTCACCAAAATGCACTAGTTTTGAAGCAAATTCTCAAGAGATGTTCAAGCCTAGGAAAGAAACATGGTTACGATGATTATGGTCTCCCTCTTGATGTCCCAAAAGGCCATTTTGCTGTTTATGTTGGTGAAAACAGAAGTAGGTATATAGTTCCAATCTCATTCTTGGCTCACCCTGAGTTCCAATCCCTCCTTAGGCAAGCTGAAGAAGAATTTGGCTTTGATCATGATATGGGTCTTACTATTCCTTGTCAGGAAGTTGTTTTCCGCTCTCTGACTTCATCAATGATGAGATGA 321 0.3956 MANRKSNKFHQNALVLKQILKRCSSLGKKHGYDDYGLPLDVPKGHFAVYVGENRSRYIVPISFLAHPEFQSLLRQAEEEFGFDHDMGLTIPCQEVVFRSLTSSMMR 106
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0108 106 Pfam Auxin responsive protein 36 103 IPR003676 GO:0009733
Lal2g0108 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 106 IPR003676 GO:0009733
Lal2g0108 106 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 10 106 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lal2g0108 Lal-Chr2 667944 668264 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0108 38 100 Calmodulin-binding Proteins AT3G43120 55.556 1.45e-20 79.3
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0108 2 667944 668264 Lal2g0108 2 667944 668264 ECH
Lal2g0108 2 667944 668264 Lal15g1507 15 17201197 17201502 ECH
Lal2g0108 2 667944 668264 Lal23g1461 23 14967820 14969256 ECH
Lal1g0186 1 1124795 1125115 Lal2g0108 2 667944 668264 LSH