Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0105 ATGGGTATTCGTTTGCCGTTTATGGTGCTTCATGCAAAACAGATATTGAAATCCACATCACAGAATGTCCATAATAGAAATAAGTACAATGTTCCAAAGGGGCATGTAGCAGTATATGTTGGAGAGTTGCAAAAGAAGAGGTTTGTGGTTCCAATATCATACTTGAACCATCCTTCTTTCCTTGACTTGCTAAACCACACTCAGGAAGAGTTTGGCTTCAATCATTCCATGGGAGCTCTTACCATTCTTTGCAAAGAAGATGCATTCATCACTCTTACCTCTCAACTCAGTGCCTCTTGA 300 0.4 MGIRLPFMVLHAKQILKSTSQNVHNRNKYNVPKGHVAVYVGELQKKRFVVPISYLNHPSFLDLLNHTQEEFGFNHSMGALTILCKEDAFITLTSQLSAS 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0105 99 Pfam Auxin responsive protein 13 94 IPR003676 GO:0009733
Lal2g0105 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 98 IPR003676 GO:0009733
Lal2g0105 99 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0105 Lal-Chr2 656171 656470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0105 29 89 Calmodulin-binding Proteins AT5G20810 52.459 6.32e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0105 K14488 - gmx:102663761 148.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0105 2 656171 656470 Lal2g0105 2 656171 656470 ECH
Lal1g0177 1 1101774 1102022 Lal2g0105 2 656171 656470 LSH