Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0101 ATGGAGGACGGCGAGCTTGATTTCTCCAACCAGGAAGTTTTTGCAAGTCCAAACATGGCTGAATTTCCTAGCAGTGGTTCAATGGACAGTTTCTTTGAGACACTCCTCAACGACAATCCTCATGCTTGCACTCACACTCACACTTGCAACCCTCCTGGTCCTGATTTTTCACACACCCACACCTGTTACCATGTCCACACCAAAATTGTGCCTGCCCCGGGTGAAGACCAGGTTGCCACTGATGATAGTGCTGAGTCTTCTGAAAAGAAGTCGAAAAAGCGTCCCGTGGGTAATCGTGAAGCTGTTCGCAAGTACCGTGAGAAGAAAAAAGCTCGCACTGCATCTCTGGAGGACGAGGTTGTCAAACTGAGAGCTTTGAATCAGCACTTGATGAAGAAGTTGCAAGGTCAGGCTGCTTTAGAGGCAGAGGTTGCAAGGCTAAAGTGCTTGCTAGTTGACATACGGGGAAGGATTGATGGAGAAATTGGATCATTCCCGTATAAGAAACCAGCCAATTCAAATCTGCCAATCCCAAACATTCCGGGTTCTTATGTGATGGACCCGTGTAACATTCAGTGTGATGACCGGGCATATTGCCCTGGTCCAGGAGCAGACGGGGAGATCACAGAAGGTGCATCACTAAATGGGGAAGGGTTTAATGGTTGCGAATTTGAGAATCTCCAATGTGAGTTGGGGCTCAAGGATCTTCTTGCTTGTGGAGTTGGACAGACTTTGTCTAATGTCCATTCTTTTGCATGA 759 0.4756 MEDGELDFSNQEVFASPNMAEFPSSGSMDSFFETLLNDNPHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPAPGEDQVATDDSAESSEKKSKKRPVGNREAVRKYREKKKARTASLEDEVVKLRALNQHLMKKLQGQAALEAEVARLKCLLVDIRGRIDGEIGSFPYKKPANSNLPIPNIPGSYVMDPCNIQCDDRAYCPGPGADGEITEGASLNGEGFNGCEFENLQCELGLKDLLACGVGQTLSNVHSFA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0101 252 Pfam Basic region leucine zipper 87 143 IPR004827 GO:0003700|GO:0006355
Lal2g0101 252 SMART brlzneu 85 153 IPR004827 GO:0003700|GO:0006355
Lal2g0101 252 Coils Coil 106 126 - -
Lal2g0101 252 MobiDBLite consensus disorder prediction 82 104 - -
Lal2g0101 252 CDD bZIP 92 145 - -
Lal2g0101 252 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 135 IPR004827 GO:0003700|GO:0006355
Lal2g0101 252 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 234 - -
Lal2g0101 252 SUPERFAMILY Leucine zipper domain 90 136 IPR046347 GO:0003700|GO:0006355
Lal2g0101 252 PANTHER BASIC LEUCINE ZIPPER 23 1 234 - -
Lal2g0101 252 MobiDBLite consensus disorder prediction 73 111 - -
Lal2g0101 252 Gene3D - 77 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0101 Lal-Chr2 637295 638053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0101 1 229 bZIP Transcription Factor Family AT4G35040 65.652 3.60e-110 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal2g0101 bZIP_2 1.9e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0101 K25785 - gmx:780549 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0101 2 637295 638053 Lal2g0101 2 637295 638053 ECH
Lal1g0169 1 1066178 1073056 Lal2g0101 2 637295 638053 LSH
Lal2g0101 2 637295 638053 Lal9g0124 9 819518 822238 LSH