Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0093 ATGCGTAGAGAGATCTCGTTTCTCGTTCAACCGCGATGCCTCCTTCTCTTCCTTGTCCTTTCAATCTTCCTCGTTTTCGCATTATCTGGCTTTAAATTGGCCGAGGAGAAAGTAGAAGAGGACCATGAAATTACACACAGAGTATTTTTGGATGTTGATATTGATAAACAACGTTTAGGTAGGATTGTGATTGGATTATATGGCCATGTTGTACCAAAAACTGTAGAAAACTTTAGAGCCTTATGCACAGGAGAGAAAGGCGAAAGTGCCAGTGGCTTAAAACTTCATTACAAAGGCACACCACTTCATCGGATAATATCTGGTTTCGTGATTCAGGGCGGAGACATTGTCCATCATGATGGCAAGGGATCTGGATCTATCTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATAAAACATTCTCATGCTGGCGTTGTCTCTATGACGAATTCAGGACCTGATTCCAATGGTTCACAGTTTTTCATTACAACGGTGAAGGCCTATTGGTTGGATGGAGAGCATGTTGTATTTGGGAAGGTTGTTGAAGGGATGGATATTGTTTTTGCAATTGAAGGTGGAGCTGGAACCTACAGTGGAAAACCCCGAAAGAAGGTTGTTATTGCAGACTCTGGAGAGATACCCAAGAGCCAGTGGGAGGAGGAACATTGA 672 0.4286 MRREISFLVQPRCLLLFLVLSIFLVFALSGFKLAEEKVEEDHEITHRVFLDVDIDKQRLGRIVIGLYGHVVPKTVENFRALCTGEKGESASGLKLHYKGTPLHRIISGFVIQGGDIVHHDGKGSGSIYGGTFPDENFKIKHSHAGVVSMTNSGPDSNGSQFFITTVKAYWLDGEHVVFGKVVEGMDIVFAIEGGAGTYSGKPRKKVVIADSGEIPKSQWEEEH 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0093 223 Gene3D - 34 220 IPR029000 -
Lal2g0093 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 81 IPR002130 GO:0000413|GO:0003755
Lal2g0093 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 114 IPR002130 GO:0000413|GO:0003755
Lal2g0093 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 145 160 IPR002130 GO:0000413|GO:0003755
Lal2g0093 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 172 IPR002130 GO:0000413|GO:0003755
Lal2g0093 223 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 188 IPR002130 GO:0000413|GO:0003755
Lal2g0093 223 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 52 211 IPR002130 GO:0000413|GO:0003755
Lal2g0093 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 20 222 - -
Lal2g0093 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 20 222 - -
Lal2g0093 223 SUPERFAMILY Cyclophilin-like 42 214 IPR029000 -
Lal2g0093 223 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 49 213 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0093 Lal-Chr2 580786 584202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0093 60 211 U-box Gene Family AT5G67530 41.830 5.00e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0093 - - tcc:18607570 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0151 1 971272 975170 Lal2g0093 2 580786 584202 LSH