Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0073 ATGTACTTTAGTAGAATACAGGGCAGATATCGGAGATGGGCTTCAGTGTTGCAGCCATGCTTTTTCAGGCCAAGATTATCTGGTCATGCAGGCTTTCAATCTTTATCCCCCAAGACTACTTTGAAAGAATGCACGTCACATGGTAGTATCATCAGAAGACATCTTTTTGGTTCAGATTCATTGAGGTGTGCTTCGTCTAAAAATAGTTGTCTCGGTCTGGATAAAAGGCCTACTTTATGGAGTACACGTCTACGTGCTTATAGTTCTGATAGTGGTGGAAGAAATGCTAGTGAGGATAAGCATGTACATGTCAATGACAGAGCTAATCTTGATATCAAGTGCTGCAATGCACATTCACATGCACGGATAGGAGAACAAGATCAAGAGGAATGGCTTAATAATGAGAAGCTTTCCATAGAAAGTAAAAAGAGAGAATCACCATTTTTGACAAGAAGGGATAAGTTTAAAAACGAGTTTCTCAGAAGAATTGTTCCTTGGGAGAAGATTAACATTTCATGGGACACATTTCCTTATCACATTAATGAACATACAAAAAATCTTCTGGTGGAATGTGCTGCTTCCCATCTGAGACACAATAAGTTTGCTTCGTCTTTTGGCTCACGCCTTACATCTTCAAGTGGGAGAATATTGCTTCAGAGCATTCCTGGCACCGAGCTCTATCGTGAGAGAGTAGTTAGAGCTCTTGCACAAGATTTACAAGTTCCTTTGTTGGTGCTTGATTGTAGCATCATTGCTCCTTATGATATGGATGATGATTTATCAGACTACGAGTCTGATGATGATAATGCGGACTCGGGGGAAGAAGGTTCAATAGAGTCAGAGAATGAGGATGACAATGATGCTAGTAATGAAGAAGAGTGGGCTAGTAGTACCGAGGTAAAGTCAGATGCAAGTGATAATGATGACGCAATTGCACATGCTGAAGCAGCTCTTAAGAAGGTTAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACATTGAAGAATTTGAGAAGATTGCGTCCGTAGGGTCAGAGAGTTCTGATTCATCTAAGTCCAGTGATGCCAAGTCTTCTGATAAATCTGGGTGCCAACTAAGGAAAGGTGACCGTGTGAAGTACATTGGGCCATCTGTTCAAGTTACAGCTGACGATAGGGTTGTACTGGGGACAATACCAACATCTGATGGTCCAACTAAAGTCTATACTATTATTCATGGCAGGCCTTTAACCAGCGGTCAGAGAGGAGAGGTATATGAGATGAATGAAGATCAAGATCGAGTTGCTGTCATCTTGGACATTAATGAAGACAGTGCTAATGAGGGTGAGGTGGAGAACCTTAATGACGGGCATAGAAAACCAGCAATTTATTGGATACATGTTAAGGACGTTGAGAAAGATCTTGATGCACAAGCACAAGATTGCTACATAGCGGTGGAGGCTTTATGTGAGGTTCTGAAATCCAGACAACCTCTTATTGTTTATTTTCCAGACAGCTCACAGTGGCTGCATAAATCTGTTCCTAAGTCAAACCGAAAGGAGTTTTTTCATAAGGTTGAAGAGATGTTTGACAAGTTATGTGGTCCTGTGGTGTTGATTTGTGGGCAGAACAGAGTCCAGTCAGGATCAAAGGAAAAGGAACAATTTACAATGATACTTCCAAACTTTGGACGTGTTGCAAAGCTGCCTTTGTCTCTGAAACGGTTGACTGACGGATTTAAAGGGGCAAAGAGCTCGGAAGATGATGAAATTTACAAGCTTTTCTCTAATGTTTTGTGTGTACATCCACCTAAGGATGATAATCTGCTTGTAACATTTAAGAAACAACTTGATGAAGACAGGAAAATTGTGATTTCACGTAGTAATTTGAATGAACTACGAAAGGTTCTTGAAGAGCATCAGTTATCATGCACAGACCTATTGCATGTAAATACTGATGATGTCATTTTGACAAAGCAAAAAGCTGAAAAGGTTGTAGGCTGGGCAAAAAATCATTACTTGTCATCATGCCTGCTTCCTTCTGTTAAAGGAGAACGATTGTGGCTCCCTCGTGAAAGGGCTTTTAACCTTATATTGATTTCTGTTAATCAGAGCCTTGCAAAGGATGAGTTTGAGAGCAATTTCATTTCAGCCGTAGTACCTTCAGATGAAATTGGGGTGAAGTTTGATGACATAGGAGCTCTTGAAGATGTGAAGATGACACTTAATGAGCTTGTAATTCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTGCGGCCCTGCAAAGGGATATTACTCTTCGGTCCTCCTGGAACTGGGAAAACTCTACTGGCCAAGGCATTGGCAACAGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCAACTCTTACTTCAAAGTGGTTTGGAGATGCTGAAAAACTAACTAAAGCCCTTTTCTCCTTTGCCAGCAAGCTTGCTCCTGTCATCATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCTCGAGGTGGTTCTTTTGAACATGAGGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAGAACCAAAGAATCCTCATTCTTGGTGCAACAAACCGACCATTCGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATATTGATTTACCAGATGCTGAAAATCGAATGAAGATTTTGAGAATAGTCCTTGCACAAGAAAGTTTGGTTCCTGATTTTGAGTATGACGAACTTGCTAAGTTGACTGAAGGATACTCTGGCAGCGATTTGAAGAACCTTTGTATTGCTGCTGCATATAGGCCTGTTCAAGAGCTCATAGAGGAAGAGAAAAAGGGAGGCAATAATGGTATACCTTCAGTATTAAGGGCTCTTAATCTAGATGATTTTGTTGAGTCAAAAGCTAAGGTGGGGCCATCAGTTGCATATGATGCTACAAGCATGAATGAATTGAGGAAGTGGAATGAAATGTATGGAGAAGGTGGTAGTAGGACAAAGTCACCATTTGGATTTGGGAGCTGA 3042 0.4093 MYFSRIQGRYRRWASVLQPCFFRPRLSGHAGFQSLSPKTTLKECTSHGSIIRRHLFGSDSLRCASSKNSCLGLDKRPTLWSTRLRAYSSDSGGRNASEDKHVHVNDRANLDIKCCNAHSHARIGEQDQEEWLNNEKLSIESKKRESPFLTRRDKFKNEFLRRIVPWEKINISWDTFPYHINEHTKNLLVECAASHLRHNKFASSFGSRLTSSSGRILLQSIPGTELYRERVVRALAQDLQVPLLVLDCSIIAPYDMDDDLSDYESDDDNADSGEEGSIESENEDDNDASNEEEWASSTEVKSDASDNDDAIAHAEAALKKVKAAVQKLVPYNIEEFEKIASVGSESSDSSKSSDAKSSDKSGCQLRKGDRVKYIGPSVQVTADDRVVLGTIPTSDGPTKVYTIIHGRPLTSGQRGEVYEMNEDQDRVAVILDINEDSANEGEVENLNDGHRKPAIYWIHVKDVEKDLDAQAQDCYIAVEALCEVLKSRQPLIVYFPDSSQWLHKSVPKSNRKEFFHKVEEMFDKLCGPVVLICGQNRVQSGSKEKEQFTMILPNFGRVAKLPLSLKRLTDGFKGAKSSEDDEIYKLFSNVLCVHPPKDDNLLVTFKKQLDEDRKIVISRSNLNELRKVLEEHQLSCTDLLHVNTDDVILTKQKAEKVVGWAKNHYLSSCLLPSVKGERLWLPRERAFNLILISVNQSLAKDEFESNFISAVVPSDEIGVKFDDIGALEDVKMTLNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGSFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYIDLPDAENRMKILRIVLAQESLVPDFEYDELAKLTEGYSGSDLKNLCIAAAYRPVQELIEEEKKGGNNGIPSVLRALNLDDFVESKAKVGPSVAYDATSMNELRKWNEMYGEGGSRTKSPFGFGS 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0073 1013 Gene3D - 892 977 - -
Lal2g0073 1013 MobiDBLite consensus disorder prediction 259 306 - -
Lal2g0073 1013 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 63 1011 - -
Lal2g0073 1013 Pfam AAA+ lid domain 913 949 IPR041569 -
Lal2g0073 1013 Gene3D - 719 995 IPR027417 -
Lal2g0073 1013 MobiDBLite consensus disorder prediction 352 367 - -
Lal2g0073 1013 SMART AAA_5 756 893 IPR003593 -
Lal2g0073 1013 MobiDBLite consensus disorder prediction 341 368 - -
Lal2g0073 1013 CDD AAA 758 891 - -
Lal2g0073 1013 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 63 1011 - -
Lal2g0073 1013 MobiDBLite consensus disorder prediction 259 292 - -
Lal2g0073 1013 ProSitePatterns AAA-protein family signature. 863 882 IPR003960 GO:0005524|GO:0016887
Lal2g0073 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 718 942 IPR027417 -
Lal2g0073 1013 Pfam ATPase family associated with various cellular activities (AAA) 760 890 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0073 Lal-Chr2 416286 432384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0073 754 955 Calmodulin-binding Proteins AT3G56690 34.783 8.68e-32 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0073 - - gmx:100802939 1524.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0073 2 416286 432384 Lal9g0099 9 629359 643065 LSH