Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0047 ATGGAGATAGAAGCAGACAGTGGTAACAGGAAAGAGAGGGAAGTGATATATGGTAACCTAAATAGGGGAAGCTACTTGGTATGGGAAGATCTAAGAGTGGTGATACCAAATTTTGGGAAGGGACCAACGAAGAGGTTGCTTAATGGGATTAATGGTTATGCTGAACCTGGTAGGATCACTGCTATTATGGGTCCTTCTGGCTCTGGAAAATCCACCCTCCTTGATTCACTAGCAGGTAGACTCTCAAAAAATGTGGTGATGACAGGAAATGTTCTTCTGAACGGAAAGAAGCAAAGCCTAGGCTATGGTTTTGTTGCATACGTAACACAAGAGGATGTACTGCTAGGAACTCTAACTGTGAAAGAAACAATATCTTATTCAGCGAATCTGCGTCTTCCAACTACAATGAGCAAAGAAGAAATTGAAGGCATAGTGGATGGAACAATCATAGAAATGGGTCTTCAAGATTGTGCTGATAGATTAATTGGTAACTGGCATTTGAGAGGGATAAGTGGAGGTGAGAAGAAAAGGGTTAGCATTGCACTTGAAATCCTTACAAGGCCTAGATTATTGTTTCTTGATGAACCAACCAGTGGTCTTGACAGTGCCTCAGCATTTTTTGTTGTTCAAACTCTTAGAAATGTTGCTCGTGATGGAAGAACTGTTATCTCTTCCATTCACCAGCCTAGCAGTGAAGTCTTTGCACTCTTTGATGACCTTTTCTTACTTTCTGGTGGTGAAACTGTTTACTTTGGAGAAGCTAAAATGGCTGTAGAGTTTTTTGCTGAAGCTGGTTTTCCTTGTCCACGTAAAAGAAATCCTTCTGATCACTTCTTAAGGTGTATCAATTCTGATTTCGACATTGTAACAGCAACACTGAAGGGGTCTCAAAGAATTCCTGATGTTCCAAATTCAGCAGATCCTTTCATGAATTTAGCTACAGCAGAGATTAAGGCAATGCTAGTTGAGAAATATAGGCGGTCAACCTATGCCAAAAGGGCAAAAGCCAAGATTCAAGAACTATCTACCAAGGAAGGACTTGAAACTGAGGCACAGAATGGAAGTCAAGCTAGTTGGTGGAAGCAATTATCAACCTTGACAAAAAGATCAATGGTCAACATGTGTAGAGATGTTGGTTACTACTGGTTGAGGATTATAATATACATCATTGTATCTATATGTGTTGGAACTATTTATTTTGATGTTGGCTATAGCTATACTTCAATCCTTGCCCGTGGTGCTTGTGGTGCATTTATATCAGGATTCATGACATTCATGTCAATTGGTGGCTTTCCATCTTTCATTGAAGAAATGAAGGTTTTTTATCGTGAAAGGCTTAATGGATATTATGGAGTTGCAGCATATATATTAGCCAACTTTCTTTCTTCTTTCCCATTCTTGATAGCCATTGCTCTTACTACTGGCACCATTACTTATAACATGGTGAAATTCAGGCCAGGATTCATTCACTTCGTGTTTTTCACTCTTAACATCTTAAGCTGTATCTCAGTAATTGAGAGCCTCATGATGGTTGTAGCTTCACTTGTTCCAAATTTCCTCATGGGAATAATTACAGGGGCTGGATTGATTGGAATCATGATGATGACCTCTGGATTCTTTAGATTACTGTCTGATCTTCCAAAACCGGTTTGGCGCTACCCGATTTCATATATCAGTTATGGTGCATGGGCAATTCAGGGTTCTTACAAGAATGACTTGCTTGGGCTTGAATTTGAACCTTTGATACCTGGTGACCCAAAATTGAGTGGAGAGTATGTGATCACACACATGTTGGGCATTGAATTAGACCATTCCAAGTGGTGGGACTTAGCAGCACTACTAATCATTCTCATATTTTATAGAATTCTTTTCTTTACTATTCTCAAGTTCAAGGAGAGAGCATCCCCACTATTTAAGTCACTTTATGCAAAGAGAACCATACAACAGCTTGAAAAGAGACCTTCTTTCAGGATGGTGCCATCTTTCCCTTCCCAGAGGCATCAACCCCTTCGTTCACTCTCTTCTCAAGAGGGTCTTGATTCTCCACTCCACTAG 2055 0.4005 MEIEADSGNRKEREVIYGNLNRGSYLVWEDLRVVIPNFGKGPTKRLLNGINGYAEPGRITAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNVLLNGKKQSLGYGFVAYVTQEDVLLGTLTVKETISYSANLRLPTTMSKEEIEGIVDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRVSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRNVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIPDVPNSADPFMNLATAEIKAMLVEKYRRSTYAKRAKAKIQELSTKEGLETEAQNGSQASWWKQLSTLTKRSMVNMCRDVGYYWLRIIIYIIVSICVGTIYFDVGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERLNGYYGVAAYILANFLSSFPFLIAIALTTGTITYNMVKFRPGFIHFVFFTLNILSCISVIESLMMVVASLVPNFLMGIITGAGLIGIMMMTSGFFRLLSDLPKPVWRYPISYISYGAWAIQGSYKNDLLGLEFEPLIPGDPKLSGEYVITHMLGIELDHSKWWDLAALLIILIFYRILFFTILKFKERASPLFKSLYAKRTIQQLEKRPSFRMVPSFPSQRHQPLRSLSSQEGLDSPLH 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0047 684 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 270 IPR003439 GO:0005524
Lal2g0047 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 22 679 - -
Lal2g0047 684 CDD ABCG_EPDR 23 252 - -
Lal2g0047 684 Gene3D - 23 264 IPR027417 -
Lal2g0047 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 259 IPR027417 -
Lal2g0047 684 MobiDBLite consensus disorder prediction 659 684 - -
Lal2g0047 684 Pfam ABC-2 type transporter 227 284 IPR043926 GO:0140359
Lal2g0047 684 ProSitePatterns ABC transporters family signature. 170 184 IPR017871 GO:0005524
Lal2g0047 684 Pfam ABC-2 type transporter 362 571 IPR013525 GO:0016020|GO:0140359
Lal2g0047 684 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 22 679 - -
Lal2g0047 684 SMART AAA_5 56 227 IPR003593 -
Lal2g0047 684 MobiDBLite consensus disorder prediction 661 684 - -
Lal2g0047 684 Pfam ABC transporter 47 198 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0047 Lal-Chr2 274798 280516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0047 42 239 Calmodulin-binding Proteins AT2G36910 30.415 1.41e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0047 K05681 - gmx:100807692 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0047 2 274798 280516 Lal2g0047 2 274798 280516 ECH
Lal2g0047 2 274798 280516 Lal9g0066 9 399492 404939 LSH