Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0046 ATGGAGATAAAAGAAGAGTACAACGCAAATAGGAATGAGATGAGAGTAAGAGATAATAAGAAAGGAATGATGTACCTCGTGTGGGAAGATTTGAGTGTAATAGTTCCAAATTATGGGAATGGACACACAAGGAGGTTGCTTAATGGGTTGAGTGGATATGCAGAACCAAATAGAATCATGGCTATTATGGGTCCTTCTGCCTCAGGAAAATCTACTCTTCTTGATGCTTTGGCAGGTAGACTTTCCAGAAATGTTATCATGTCTGGAAAAGTGCTTCTAAATGGAAAGACGAAGAGATTAGACTATGGGGGTGTAGCTTATGTGACCCAAGAAGACACATTGTTGGGAACACTAACAGTTAGAGAGACAATTTCATACTCAGCTAATCTAAGGCTTCCAGCAACCATGACCAAAGAAGAGATAAATAACACTGTAGAGGGAATAATAATGGAGATGGGTCTTCAAAACTGTGCTGATAGGATTTTAGGGAATTGGCACTTAAGAGGTATAAGTGGTGGAGAAAAGAAAAGACTAAGCATAGCACTTGAAATTCTCACAAGGCCTAGCCTCTTGTTCCTTGATGAACCTACCAGTGGTCTGGATAGTGCCTCGGCATATTTTGTTGTACAAACTTTGAGAAACATAGCTCATGATGGGAAAACTGTTATCTCTTCCATACATCAACCAAGTAGTGAGGTTTTTGAACTCTTTGATGATCTCTTTCTGCTCTCTGGGGGTCAAACAATATACTTTGGAGCAGCTGAAAAGGCAGTTGAGTTCTTTGCCAAAGCAGGATTCCCCTGTACAAGTAGAAGAAACCCTTCTGATCATTTCCTCCGTTGTATTAATTCAGACTTTGACACTGTTACGACGACTATGATGGCCTTCCAGAGAATGCATGAACCAAAATCAATAACATCGCTAATGAACTTACCAACTGCAACAATCAGAGCAAAACTCATTGAGAAATACCGGTGGTCAGAATATGCAACTACTGCAAGAGCAAGAATCAAAGAAATCTCAAACATTGAAATCCTGTTACAGGAAGGAGAAGACGCTGAAAGCAAAATCATGAGCCAAGACAATTGGTGGAAGCAGCTATCAACATTGACTAGGAGATCTTTCTTGAACATGTCCAGAGACCTTGGGTACTATTGGATAAGGGTAGCAATCTATATTGTCTTATCTGTGTGTGTTGGTTCAGTCTTTTTTGAAGTTGGAACAAGTTATAGTGCGATTCTTGCAAGAGGAGCATGTGGCGCTTTTATTTCAGGTTTCATGACATTCATGTCGATAGGAGGCTTCCCATCCTTCATAGAAGAAATGAAGGTCTTTTATAAAGAAAGGATTAATGGGCACTATGGAATTGCTGTCTACATACTGTCAAATTTTTTGTCTTCCTTTCCCTTTGTGGCAATGATGTCCATTGCTACTGGCACTATAACCTATTATATGGTTAAGTTTCGTCCTGAGTTTTCACATCTTGTGTATATATGTCTTGATCTTATTGGCTGCATTGCCATTGTGGAGAGTTCCATGATGATTATAGCCTCACTAGTTCCCAACTACCTCATGGGATTGATAATTGGAGCAGGATATATTGGAGTAATGATGATGACTGCTGGCTATTTCCGACAGATCAGTGATCTTCCCAAAATCTTCTGGCGTTACCCAATTTCATACATCAATTATAGCGCATGGGGATTGCAGGGAGCTTTCAAAAATGACTTGATTGGGCTGGAGTTTGATCCATTAATACCTGGTGGCCCAAAACTGGAAGGAAAAATCATCCTCACAACCATGCTTGGTATGCGAGTTGATTATTCAAAATGGTGGGACTTATCTGCAGTCATAGTCATCCTCATATTGCTTAGAGTTCTGTTCTTTTTCGTTCTTAAATTTAAGGAGAGAGCTTCACCTTTACTTCAGAGTATCTATGCCAAGCAAGCTCTGCAACACATCAAGAAGCGACCTTCATTCAGGAATGTGGCACCATCTTTCCCTTCCAAGAGGCACCAATCACTGCATCCACTGTCTTCTCAAGAGGGTCTCAACTCCCCTATTCATCAGAACTTAGAAGCATCATTTGCTGATACGAAAACAAAAGAATTACACAACATATCCGAATGCGATATGTAG 2139 0.4021 MEIKEEYNANRNEMRVRDNKKGMMYLVWEDLSVIVPNYGNGHTRRLLNGLSGYAEPNRIMAIMGPSASGKSTLLDALAGRLSRNVIMSGKVLLNGKTKRLDYGGVAYVTQEDTLLGTLTVRETISYSANLRLPATMTKEEINNTVEGIIMEMGLQNCADRILGNWHLRGISGGEKKRLSIALEILTRPSLLFLDEPTSGLDSASAYFVVQTLRNIAHDGKTVISSIHQPSSEVFELFDDLFLLSGGQTIYFGAAEKAVEFFAKAGFPCTSRRNPSDHFLRCINSDFDTVTTTMMAFQRMHEPKSITSLMNLPTATIRAKLIEKYRWSEYATTARARIKEISNIEILLQEGEDAESKIMSQDNWWKQLSTLTRRSFLNMSRDLGYYWIRVAIYIVLSVCVGSVFFEVGTSYSAILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERINGHYGIAVYILSNFLSSFPFVAMMSIATGTITYYMVKFRPEFSHLVYICLDLIGCIAIVESSMMIIASLVPNYLMGLIIGAGYIGVMMMTAGYFRQISDLPKIFWRYPISYINYSAWGLQGAFKNDLIGLEFDPLIPGGPKLEGKIILTTMLGMRVDYSKWWDLSAVIVILILLRVLFFFVLKFKERASPLLQSIYAKQALQHIKKRPSFRNVAPSFPSKRHQSLHPLSSQEGLNSPIHQNLEASFADTKTKELHNISECDM 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0046 712 ProSitePatterns ABC transporters family signature. 170 184 IPR017871 GO:0005524
Lal2g0046 712 SMART AAA_5 56 255 IPR003593 -
Lal2g0046 712 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 21 684 - -
Lal2g0046 712 MobiDBLite consensus disorder prediction 666 684 - -
Lal2g0046 712 CDD ABCG_EPDR 23 252 - -
Lal2g0046 712 Gene3D - 13 266 IPR027417 -
Lal2g0046 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 261 IPR027417 -
Lal2g0046 712 Pfam ABC transporter 47 198 IPR003439 GO:0005524
Lal2g0046 712 Pfam ABC-2 type transporter 366 575 IPR013525 GO:0016020|GO:0140359
Lal2g0046 712 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 270 IPR003439 GO:0005524
Lal2g0046 712 MobiDBLite consensus disorder prediction 661 684 - -
Lal2g0046 712 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 21 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0046 Lal-Chr2 267950 273348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0046 45 241 Calmodulin-binding Proteins AT2G36910 29.954 1.29e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0046 K05681 - gmx:100788651 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0046 2 267950 273348 Lal2g0046 2 267950 273348 ECH
Lal2g0046 2 267950 273348 Lal9g0066 9 399492 404939 ECH
Lal20g0100 20 645933 650082 Lal2g0046 2 267950 273348 ECH
Lal1g0086 1 604525 612185 Lal2g0046 2 267950 273348 LSH