Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0016 ATGGGCAAAGCAATTTGTTTTGTTATTCTATCCTTTCACATTATTATTCTCTCATTCTTTGTGGGTGAAATATGTGGAAACAAGCAAGTTAGAGCTCTGGATAATTTGCACAAGTCCAAGTTGAGAGGAGGTTCAGAAATTGATAGGAGGAGTGAGTTTAAGGTTGAAGAGTTAGTGCATGATGATGATGATGTTATTGTTGATTCTGAAGAAGAAGAGATATCATTATTAAAAGAGAAAGATAAGATTGAAAGACTTCCTGGGCAGCCTCAAGTGAAGTTCTCTCAATATGGAGGCTATATCACAATTCATAAATTGGCTGGCACTGCCTTTTACTACTATTTTGTTGAAGCTCATCAACGTTCTAAACAATCACTTCCACTTCTTCTTTGGCTCAACGGAGGCCCCGGATGTTCATCTCTTGCTTATGGAGCAATGCAGGAACTTGGACCCTTTCGAGTACATAGTGATGGCAAAACACTATTCAAAAATAATTATTCATGGAACTATGCTGCAAATGTTTTGTTCTTGGAGTCACCTGTCGGAGTAGGATTTTCTTATTCAAATAGATCATCAGATTACTCAACCAATGGAGATAAAAAAACAGCCGTAGATAACTATCTATTCTTGGTGAACTGGTTGGAGAGGTTTCCGGAGTATAAGGATAGGGATTTCTACATTTCCGGGGAGAGTTATGCTGGACATTATGTCCCTCAACTTGCACATACTATTCTACAACTTAACAAAAAGGCAGCCAAGACAATCATCAACCTCAAAGGAATCTTGATTGGGAATGCAGTAATAAACGACGAGACAGATTCAGAAGGAATGTATGATTTTCTTGCAACCCATGCAATAATATCAGACAAAGCAGCATATGATATAAACAAATCCTGTGATTTTGCATCAAGTAATCAGAGTGAGTGTGACGCAGCTTCAAGTGAAGTTGATAAGGATATTTCCTTCATTGATTTATACAACATTTATGCTCCCATCTGCAAGAATTCCAATCTCACTGCCCACCCCAAGAAGACCTCTATTGTGATCGATCCATGCAGTGAGAATTATGTGTATGCATATCTTAATAGGGGAGATGTTCAAGAGGCCCTCCATGCAAATGTCACTAATCTCAAATATGACTGGCAACCCTGCAGTGATGTCATTACCAAGTGGCTTGATAGCCCTTCAACAGTCCTTCCTCTCATAACTCATTTCCTTAATAATGGCCTTAGAGTTTGGATTTTTAGTGGTGACATAGATGGAAGGGTGCCTGTTACTTCGACCAAGTATTCCATTGACAAGTTGAAGCTTCCCATTCAAACTGCTTGGCACCCTTGGTTTGCATATGGAGAGGTTGGTGGGTATACACAAGTATACAAGGGAAACCTAACATTTGCTACAGTTAGAGGAGCAGGGCATCAAGTGCCAAGTTACCAACCACAAAGAGCACTTTCTTTGATCAAACATTTCTTAAGGGGCACTCCTCTTCCTGAAACTACAAGAATTGCTTAG 1512 0.3948 MGKAICFVILSFHIIILSFFVGEICGNKQVRALDNLHKSKLRGGSEIDRRSEFKVEELVHDDDDVIVDSEEEEISLLKEKDKIERLPGQPQVKFSQYGGYITIHKLAGTAFYYYFVEAHQRSKQSLPLLLWLNGGPGCSSLAYGAMQELGPFRVHSDGKTLFKNNYSWNYAANVLFLESPVGVGFSYSNRSSDYSTNGDKKTAVDNYLFLVNWLERFPEYKDRDFYISGESYAGHYVPQLAHTILQLNKKAAKTIINLKGILIGNAVINDETDSEGMYDFLATHAIISDKAAYDINKSCDFASSNQSECDAASSEVDKDISFIDLYNIYAPICKNSNLTAHPKKTSIVIDPCSENYVYAYLNRGDVQEALHANVTNLKYDWQPCSDVITKWLDSPSTVLPLITHFLNNGLRVWIFSGDIDGRVPVTSTKYSIDKLKLPIQTAWHPWFAYGEVGGYTQVYKGNLTFATVRGAGHQVPSYQPQRALSLIKHFLRGTPLPETTRIA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0016 503 ProSitePatterns Serine carboxypeptidases, histidine active site. 463 480 IPR033124 GO:0004185
Lal2g0016 503 Gene3D - 398 493 - -
Lal2g0016 503 Pfam Serine carboxypeptidase 87 493 IPR001563 GO:0004185|GO:0006508
Lal2g0016 503 Gene3D alpha/beta hydrolase 77 335 IPR029058 -
Lal2g0016 503 ProSitePatterns Serine carboxypeptidases, serine active site. 227 234 IPR018202 GO:0004185
Lal2g0016 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 497 IPR001563 GO:0004185|GO:0006508
Lal2g0016 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 176 IPR001563 GO:0004185|GO:0006508
Lal2g0016 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 177 187 IPR001563 GO:0004185|GO:0006508
Lal2g0016 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 213 238 IPR001563 GO:0004185|GO:0006508
Lal2g0016 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Lal2g0016 503 PANTHER CARBOXYPEPTIDASE 12 497 - -
Lal2g0016 503 Gene3D - 352 389 - -
Lal2g0016 503 SUPERFAMILY alpha/beta-Hydrolases 81 497 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0016 Lal-Chr2 102440 106028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0016 361 496 Calmodulin-binding Proteins AT2G22960 30.147 2.37e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0016 K16297 - gmx:100783864 734.947