Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal2g0003 ATGAACAAACAAATTATGGGCCAAATGATTCAAATGAGTTGGCTTGACTCCACCTTTGAACAACTCTCAGACGATGCAATTGAGATTGTAATCCACCAATATGCAAGAGCATTCATTTTGATGATGATTAGTGGATTCCTTATCATAAGGTCAACTATTGACAGGTACAGAAAAGCATGTTCAGATAATTCAAGTACGAGCACTGCCACTGAAATTAATGCTCAGTATTATCAACAAGAATCTGCAAAGCTGAGGCAACAAATACAAATGTTGCAAAACTCTAATAGGCACTTAATGGGTGATGCCTTGAGCACTCTTACCGTTAAGGAACTTAAGCAGCTGGAGAATAGACTCGAGAGAGGAATCACTAGGATCAGGTCTAAAAAGCATGAGATGCTGCTGGCTGAAATTGAATACTTGCAGAAAAGGGAGATTGAACTGGAAAATGAAAATCTGTGCCTCCGGACTAAGATAGCTGAAGTTGATAGGTTTCAGCAAGCAAACATGGTTTCTGGACAAGAGTTGAATGCCATCCAAGCACTTGCTTCTCGCAATTTCTTCAATCCAATCATGATTGAAACTGGAACTGCCTACCCAGAACCAGACAAAAAGGTGATCACTGAAGAATAA 630 0.3968 MNKQIMGQMIQMSWLDSTFEQLSDDAIEIVIHQYARAFILMMISGFLIIRSTIDRYRKACSDNSSTSTATEINAQYYQQESAKLRQQIQMLQNSNRHLMGDALSTLTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENLCLRTKIAEVDRFQQANMVSGQELNAIQALASRNFFNPIMIETGTAYPEPDKKVITEE 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal2g0003 209 Coils Coil 74 94 - -
Lal2g0003 209 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL11 49 200 - -
Lal2g0003 209 Pfam K-box region 73 158 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lal2g0003 209 ProSiteProfiles K-box domain profile. 74 164 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lal2g0003 209 PANTHER SERUM RESPONSE FACTOR HOMOLOG 49 200 - -
Lal2g0003 209 Coils Coil 111 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal2g0003 Lal-Chr2 18844 23927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal2g0003 49 206 MADS-box Gene Family AT4G09960 68.072 2.97e-72 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal2g0003 K09264 - gmx:100301905 273.863