Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1195 ATGGAGGAAGTTGTGGCAGTAGCAGCCATGGCAAAAAACCTATCAAAGATAGCTTACGACGCAAAATTAGGGAAGCTTCTTAAAGAGTACAGCCGAGTACTGGTGATTTCATCTGACAACATTGGCTGCAATGAACTTCAAGGTATCCGAAGGAACCTCCACGCTGACTCAGTTGTAGTAATGGGTAAGAATTCCATGATGAAGCGTTCTTTGATGCTCGATGCTCAGAGGACTGGGAATAAGGCCTTTCTCAACCTTGCACCCCTTCTTCATGGCAACGTGGCGTTGATTTTCACTAAAAGTGATTTGAGGGAGGTTAGCGAACAGGTTGCTAAATACAAGGTCGTTGATCCTATTCTCATGTGCCCTAAGTTCATGTCATATGACTCATACCAGAATTGTTCCTACATGCAATCTGGACAGTTACCATTGAACCTCACATGTTGTAAACAACAGTCTTCACAGACTTCCGAGCCTTTTCTCGTAAGCTCAAAATTTTCGCCACACCAACATTGTTTCATGATGAGATCAAGACAGTTTTTGATGACAAGTATATGGGCACCTCTTCTCCTTTTGGCTGGTAACTTGTAA 591 0.4298 MEEVVAVAAMAKNLSKIAYDAKLGKLLKEYSRVLVISSDNIGCNELQGIRRNLHADSVVVMGKNSMMKRSLMLDAQRTGNKAFLNLAPLLHGNVALIFTKSDLREVSEQVAKYKVVDPILMCPKFMSYDSYQNCSYMQSGQLPLNLTCCKQQSSQTSEPFLVSSKFSPHQHCFMMRSRQFLMTSIWAPLLLLAGNL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1195 196 PANTHER RIBOSOMAL PROTEIN L10P-RELATED 10 195 - -
Lal25g1195 196 Gene3D - 12 134 IPR043141 -
Lal25g1195 196 Pfam Ribosomal protein L10 15 113 IPR001790 -
Lal25g1195 196 SUPERFAMILY Ribosomal protein L10-like 15 113 IPR043141 -
Lal25g1195 196 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 10 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1195 Lal-Chr25 15475783 15478040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1195 16 118 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 64.078 1.79e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1195 K02941 - mnt:21409050 145.591