Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1175 ATGGAAAATTATCCCATGTTGTTTCCTTGTCCTTCTTCTTCTTCTTCTTCTTCTAGCTACCAGATTTCAACAAGTGCTATGGGAATTTCTCATCATGATTTTAATGTAATGAATAATGGTCAAAGTTCAAATGCATTCTTGGGTTTGAGACCTAGTGATGAGAGTATTATTGATCATGATGATGATCATCGTCAGAAGTTGCTGATGAGAGCAGAAGTGTCTGATCCTCATCAGATAAGTGAAAGAAGCATCGAAGTGAGCGACGAAGTCGGTGATTCGAATAATAATAAAAAGAAAGGAGAGAAGAAAGTTAAGAAACCTAGATATGCTTTCCAAACTAGGAGTCAAGTAGATATACTTGATGATGGGTATAGATGGAGGAAATATGGTCAAAAAGCTGTTAAGAACAACAAATTCCCCAGGAGTTACTACCGATGCACTCATCAAGGGTGCAATGTGAAGAAACAAGTCCAACGCATAACAAAAGATGAGGGTGTAGTAGTGACTACCTATGAAGGAATTCACACTCACCCAATTGAGAAAACAACAGATAACTTTGAGCATATTTTGAGTCAGATGCAAATATACACTCCATTTTGA 600 0.3717 MENYPMLFPCPSSSSSSSSYQISTSAMGISHHDFNVMNNGQSSNAFLGLRPSDESIIDHDDDHRQKLLMRAEVSDPHQISERSIEVSDEVGDSNNNKKKGEKKVKKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRITKDEGVVVTTYEGIHTHPIEKTTDNFEHILSQMQIYTPF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1175 199 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 49 195 IPR044810 GO:0003700
Lal25g1175 199 Gene3D WRKY domain 105 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal25g1175 199 Pfam WRKY DNA -binding domain 121 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal25g1175 199 MobiDBLite consensus disorder prediction 72 99 - -
Lal25g1175 199 ProSiteProfiles WRKY domain profile. 115 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal25g1175 199 SUPERFAMILY WRKY DNA-binding domain 112 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal25g1175 199 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 49 195 - -
Lal25g1175 199 SMART WRKY_cls 120 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal25g1175 199 MobiDBLite consensus disorder prediction 72 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1175 Lal-Chr25 15217977 15222662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1175 108 199 WRKY Transcription Factor Family AT5G13080 85.870 2.14e-58 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal25g1175 WRKY 3.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1175 - - ccaj:109792402 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1175 25 15217977 15222662 Lal25g1175 25 15217977 15222662 ECH