Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1171 ATGGAAGAAGAAAAGAACCTTACCGAAAACTCCGATCAAAACTCCGGCGAAACGCCACGTTCTCCGATGCTCGACGCCGTAGAAACCGATCCCAAACCAACCGCTGAAACGGAAGAACATGTTACCGTGGAGGAGGATGGTGGCGTAGAAATTCCACCGGAATCTGAGTCTCCTCCACCGAGCATTGAGAAAGTTTCAGAAGACATTGATGAATTTCTCGTGAATCTTGAACAGAAGGAGAAAGAGAAAGAGAAAGAGAAAGAACCGATCCCTGGTTTTGTTGATAGGTTCTTAGATCTTGTGGAGGAGAAGATAACTAAGTATGATATTGAAGGTAAACCTAAATGGAGAGAGATAGTAGAAGAAGATGTTTTGTTTATAGAATCAGTGACTCGAATTTCTAAGCTTATGAAATTTCTGAGTAATCAAATGGAATATAGTGTTACTACTCCAAATTCTGAAGCTGATGGTGTAAAAGAAACGAAGGATTTGTTGTTTAATCGAATTGGATTAATTCAACAGCGTGCAATGTCGTATTTGGAGGAAGACTTTCGTTTCTTATTAGAAGAATCAAGAAACAATGTAATCGAGAATCAGAATGAGGTTGATCACAAGGGGAAGCAAGTTGCATCTGAATCACAAGAACCTGATCATGAAAAAGTTGAAGAATCGGATTTAGGTTTCCCTGGTTACTCCGATGACGTCATTGTCAACCTTAACAAGATCGCCGGAGTTATGATATGTGGCGGTTATGAATCTGAATGCTGTCAGGTGTATATGATTTCAAGGAGGAACGATTTTGAAGAGAGTTTGCAGAAATTAGGGTTCGAGAAAATCAGCATAGATGAGATGCAGAAGGTGCAATGGGAGACTCTAGCTAGAGACATTGTTCCGGCGTGGATCAACACGTTCAAGCAATGCATTGCAGTTTACTTTTCCGGTGAGAAGAAACTGGCGGAGGCTGTTTTTATGGATCTACCGAATGTTGCGGCGGGGCTTTTCAGCAACCTTGCCCGCGGCGTGGTGATTCAGCTTCTTAACTTTGCCGAGGGCACGGCCATGACGAAGCGTGCGGGTGAGAAGCTATTTAAGTTTCTCGATATGTATGAGACACTTCGGGATGTTATCCCGAAGCTAGATGAGTTGTTTCCCGAGGATTGTGTTGAGGAGCTGAAGACAGAGACCACACTCGCCAAGTCTAGACTTGGCGAGGCAGCGATCTCTATCTTCTGTGACCTCGAAAACTCGATCAAGTCAGAAACCGCTAGAACTCCTGTCCCCGGTGGAGCAGTTCACCCTCTCACACGCTACATCATGAACTATCTCAACATAGCAGGAGATTATAAAGAAACTTTGGAGCAGGTATTTAAGGAGCACTCGAAAATCGAGCGCGCCGATTCCACAAGCAGACCACATCATGAAAGCGATGAAAACATCATTGCTGCTGGTAGTGGTGGTGGTGATGGTGGTAACAACAAGAATGTGTCGCCATTTGCGGCACAAGTAATGAGGGTAATGGAACTTCTAGACACAAGCCTTGAAGGAAAGGCAAAGCTGTATAAGGACATTGCATTAAGCAACTTCTTTATGATGAACAATGGAAGATACATTCTACAAAAGATAAAGGGCTCTTCAGAAATGGCCCAATTGATGGGTGATTCATGGTGCAGGAAGAGATCCTCAGAGCTGAGAACATACCACAAGATTTATCAAAGGGAAACATGGAACAGAGTTGTTGCTTGTCTAACACATGAAAAGTTGAATGTGAATGGAAAAGTGCAGAAACCAGTGCTGAAGGAAAGGTTCAAAAGCTTCAATGCTTTGTTTGATGAGATACATAGAACACAAAGCACATGGGTTGTTAAGGATGAACAACTTCAATCAGAGTTAAGGGTTTCAATATCTGCAGTAGTGATACCAGCTTATAGGTCATTCCTTGGAAGATTTGCACAATACTTGGATCCAGGAAGACAAACAGAGAAATATGTAAAGTATCAAGCTGATGATATAGAAACTTACATTGAGGAATTGTTTGATGGAAAACCTCATCAATCCATTGCTAGAAGAAAAACATAG 2076 0.4229 MEEEKNLTENSDQNSGETPRSPMLDAVETDPKPTAETEEHVTVEEDGGVEIPPESESPPPSIEKVSEDIDEFLVNLEQKEKEKEKEKEPIPGFVDRFLDLVEEKITKYDIEGKPKWREIVEEDVLFIESVTRISKLMKFLSNQMEYSVTTPNSEADGVKETKDLLFNRIGLIQQRAMSYLEEDFRFLLEESRNNVIENQNEVDHKGKQVASESQEPDHEKVEESDLGFPGYSDDVIVNLNKIAGVMICGGYESECCQVYMISRRNDFEESLQKLGFEKISIDEMQKVQWETLARDIVPAWINTFKQCIAVYFSGEKKLAEAVFMDLPNVAAGLFSNLARGVVIQLLNFAEGTAMTKRAGEKLFKFLDMYETLRDVIPKLDELFPEDCVEELKTETTLAKSRLGEAAISIFCDLENSIKSETARTPVPGGAVHPLTRYIMNYLNIAGDYKETLEQVFKEHSKIERADSTSRPHHESDENIIAAGSGGGDGGNNKNVSPFAAQVMRVMELLDTSLEGKAKLYKDIALSNFFMMNNGRYILQKIKGSSEMAQLMGDSWCRKRSSELRTYHKIYQRETWNRVVACLTHEKLNVNGKVQKPVLKERFKSFNALFDEIHRTQSTWVVKDEQLQSELRVSISAVVIPAYRSFLGRFAQYLDPGRQTEKYVKYQADDIETYIEELFDGKPHQSIARRKT 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1171 691 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 50 688 - -
Lal25g1171 691 PANTHER EXOCYST COMPLEX PROTEIN EXO70 50 688 IPR004140 GO:0000145|GO:0006887
Lal25g1171 691 MobiDBLite consensus disorder prediction 462 477 - -
Lal25g1171 691 MobiDBLite consensus disorder prediction 462 493 - -
Lal25g1171 691 Coils Coil 62 82 - -
Lal25g1171 691 MobiDBLite consensus disorder prediction 31 47 - -
Lal25g1171 691 Gene3D Exocyst complex component Exo70 116 688 - -
Lal25g1171 691 MobiDBLite consensus disorder prediction 202 224 - -
Lal25g1171 691 MobiDBLite consensus disorder prediction 1 66 - -
Lal25g1171 691 SUPERFAMILY Cullin repeat-like 126 679 IPR016159 -
Lal25g1171 691 Pfam Exo70 exocyst complex subunit 299 676 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1171 Lal-Chr25 15157439 15159514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1171 46 691 EXO70 exocyst subunit family AT5G13990 51.176 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1171 K07195 - gmx:100820172 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1171 25 15157439 15159514 Lal13g1556 13 15352872 15355651 PCT
Lal25g1171 25 15157439 15159514 Lal24g1196 24 13214117 13216919 PCT
Lal13g1556 13 15352872 15355651 Lal25g1171 25 15157439 15159514 PCT
Lal24g1196 24 13214117 13216919 Lal25g1171 25 15157439 15159514 PCT