Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1168 ATGGCGAACAGATACTGGGTAGTGTCTCTTCCTGTCCAAAATTCAGCATCAACTCTATGGACTCAATTACAGCAACAAATCTCTCACCATTCCTTCGATACTCCTCTCCACAGATTCAATATTCCTAATCTCCGTGTCGGAACCCTAGATTCTCTTCTATCACTCAGCGATGATCTCGCCAAGTCGAATAATTTCATGGAAGGAGTTTCGCACAAGATCAGGCGTCAGATTGAGGAGCTGGAGAGGGTTTCTGGTCTTGATAGCGGTGGCCTCACAGTTGATGGTGTTCCTGTTGATTCGTATTTGACAAGGTTTGTTTGGGATGAAGCGAAGTATCCAACAGTGTTGCCGTTGAAGGAGATCGTGGATGGTATTCATGGTCAAGTGGCAAAGATTGAGGATGATCTCAAGGTTCGCGTTTCTGAGTATAATAATATCCGCAGTCAGCTTAATGCTATCAACCGAAAGCAAACTGGAAGCTTAGCTGTCCGTGACCTTTCCAACTTGGTAAAACCTGAGGATATTGTAACTTCAGAGCATTTAACTACCCTCCTTGCAATTGTTTCCAAGTATTCACAGAAGGATTGGCTCTCAAACTACGAAACGTTGACCAGCTATGTGGTCCCCAGGTCTTCTAAGAAGCTATATGAAGATAATGAATATGCCCTTTATACTGTAACACTCTTCAATCGTGCTGCTGACAATTTTAGAACTAGTGCACGGGAAAAGGGGTTCCAAATCCGTGATTTCGAATTCAGTCCAGAAACACATGAGGGTCGAAAGCAGGAGTTAGAGAAATTGGTTCAAGATCAGGAAAGTTTGAGAAGTTCTTTGTTGCAGTGGTGCTATACCAGCTATGGCGAGGTTTTCAGCTCCTGGATGCACTTTTGCGCTGTACGTTTATTTACTGAGAGCATTCTGAGATATGGCCTGCCACCTTCTTTCTTGACCGATGATGAAGTTGGCGGTGGGATGGCTGGCCTCGCCGGTGATGCAGATGCTCACCCGATGATACCAAAAACTTAA 1026 0.4454 MANRYWVVSLPVQNSASTLWTQLQQQISHHSFDTPLHRFNIPNLRVGTLDSLLSLSDDLAKSNNFMEGVSHKIRRQIEELERVSGLDSGGLTVDGVPVDSYLTRFVWDEAKYPTVLPLKEIVDGIHGQVAKIEDDLKVRVSEYNNIRSQLNAINRKQTGSLAVRDLSNLVKPEDIVTSEHLTTLLAIVSKYSQKDWLSNYETLTSYVVPRSSKKLYEDNEYALYTVTLFNRAADNFRTSAREKGFQIRDFEFSPETHEGRKQELEKLVQDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRLFTESILRYGLPPSFLTDDEVGGGMAGLAGDADAHPMIPKT 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1168 341 CDD V-ATPase_C 5 317 IPR004907 GO:0033180|GO:0046961|GO:1902600
Lal25g1168 341 Gene3D Vacuolar atp synthase subunit c; domain 1 6 317 - -
Lal25g1168 341 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 317 IPR004907 GO:0033180|GO:0046961|GO:1902600
Lal25g1168 341 Pfam V-ATPase subunit C 5 316 IPR004907 GO:0033180|GO:0046961|GO:1902600
Lal25g1168 341 Gene3D - 163 251 - -
Lal25g1168 341 SUPERFAMILY Vacuolar ATP synthase subunit C 1 316 IPR036132 GO:0015078|GO:0033180|GO:1902600
Lal25g1168 341 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 317 - -
Lal25g1168 341 Gene3D - 41 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1168 Lal-Chr25 15136097 15149897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1168 1 341 Primary Pumps ATPases(2) AT1G12840 73.854 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1168 K02148 - gmx:100780187 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1168 25 15136097 15149897 Lal25g1168 25 15136097 15149897 ECH