Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1151 ATGGGAAGTGCTATAAAGGCAGCAATTGGAGATTTAGTGTTAACTTTCATGTGGGTTTTTTCTTCTTCTGTGTTGGGTATAGCTACTAATGCTATAACTAAAGCTTTTGATGTTCAACATATTTCTTACAATGGTTTTCCTTACCCTTCATTCTTTGTTACAACTTTCCTTGTCTTTGTACTTGTTTTTATCTTCACCATCATTGGTAATGCATTGGGTGGTGCTAGCTTTAACCCCACAGGCACAGCTTCATTCTATGCTGTTGGTCTTGGCTCTGATACCCTCTTCTCAATGGCTCTTCGTTTCCCGGCACAGGCTCTTGGTGCTGCTGGTGGTGCTATTGCAATTATGGAAGTGATTCCAAAGGAATACAAGCACATGATGGGAGGACCTTCTTTGAAAGTTGATTTACATACTGGAGCTGTTGCTGAAGGAGTATTGACATTTGTGATTACTTTTGCTGTTCTCTTCATTATCCTTAAGGGCCCTCATAGTGAGCTAATGAAGACTTGGTTGCTGGCTATGTCTACTGTGGCTTTGGTCATGGTTGGATCTGCTTATACTGGACCATCTATGAACCCTGCCAATGCTTTTGGTTGGGCATACTTAAACAACTGGCACAACACATGGGACCAATTCTATGTTTACTGGATTTGTCCCTTCATTGGAGCAATATTGGCTGCATGGTTGTTCCGGGCTATATTTCCACCACCACAAGCCAAAAAGAAACAGAAGAAAGCATGA 744 0.4167 MGSAIKAAIGDLVLTFMWVFSSSVLGIATNAITKAFDVQHISYNGFPYPSFFVTTFLVFVLVFIFTIIGNALGGASFNPTGTASFYAVGLGSDTLFSMALRFPAQALGAAGGAIAIMEVIPKEYKHMMGGPSLKVDLHTGAVAEGVLTFVITFAVLFIILKGPHSELMKTWLLAMSTVALVMVGSAYTGPSMNPANAFGWAYLNNWHNTWDQFYVYWICPFIGAILAAWLFRAIFPPPQAKKKQKKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1151 247 PANTHER AQUAPORIN SIP1-1 3 244 IPR044222 GO:0015250
Lal25g1151 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal25g1151 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal25g1151 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal25g1151 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal25g1151 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal25g1151 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal25g1151 247 Pfam Major intrinsic protein 4 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal25g1151 247 Gene3D Glycerol uptake facilitator protein. 2 247 IPR023271 -
Lal25g1151 247 PANTHER AQUAPORIN SIP1-1 3 244 - -
Lal25g1151 247 SUPERFAMILY Aquaporin-like 4 238 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1151 Lal-Chr25 14911409 14917333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1151 3 247 Major Intrinsic Protein MIP AT5G18290 57.085 1.46e-85 253