Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1150 ATGGAAACCTATGTCCAAAAAGCTCAATCTCTTCCACAAGACTTAAAAGTGATCATTCACAAAACCTCAATGATTTTTCCATCCAAAAAAACTGAGAAGAAGTCAGTGTTCTTATCAAACATAGACAAGGTCCTAAATTTCGACGTAGAAACAGTTCATTTTTTTGATGCAAACAAGGATTTTCCACCGAAAATAGTGGCCGAGAAGTTAAAAAAAGCCTTAGAAGATGCACTAGTGGTTTATGAGTTCATTGGTGGAAGATTGAAAGTGAACTCAGAAACAAAGAGGTTAGAGATAGATTGTAATGAAGAGGGTGCTGGGTTTGTGGAAGCTTCTAGTGAGTACAAGTTGAATCAGATTGGTGATTTGGTTTATCCTAATCCAGCTTTTGGACAATTTGTTCATAAGAATAAGGATTTTCTTAAACCAGGTGATGTGCCCCTATGTGTTGTTCAGTTCACATCCTTGAAGTGTGGTGGCTTTGTTATTGGCATATCAACCAGTCACACAATCTTTGATGGACTTAGCTTCAAAACTTTCTTGGACAACATTGCAGCATTGGCTGCTAACAAGCCCTTGGCTGTGACACCATTCCATGACAGGCAACTCCTTGCCGCCCGATCCCCTCCACGTGTCACTTTCTCCCACCCTGAGTTAATCAACCTTGGTAACATCCCTACAGGCCTTGAGTCTGGGCTTTGCATGGACTCCATGCAAGTACTTGACTTCAACATTTTCCGATTAACCTCCGACGATATCAACTGCCTTAAGGAGAAGGCTAAGGCTGACAGCACTGGCCGAATCACCGGATTTAACGTCATCACCGCCCATATATGGAGGTGCAAGGCATTATCTGGACCATATGATCCTAATAGGTCATCAACTATACTATACGCAGTGGACATACGATCAAGGTTGAACCCTGCGTTGCCAAAATCATATACTGGCAACGCAGTTTTAACTGCGTATGCCACTGCGAAATGTAAGGAAATTGAGGAGGGATTATTCTCGAAGTTGGTGGAGATGGTGAGAGAGGGTGCAACTAGAATGAGTGATGAATATGCAAGGTCTATTATAGATTGGGGAGAGTTATATAATGGTTTTCCAAATGGGGAAGTTTTGGTTTCTTCATGGTGGAGATTAGGGCTTGAACAAGTTGAGTATCCATGGGGAAAACCAAAGTATTGTTGTCCTGCATTGCATCATAGGAAGGATATTATATTGCTTTTTTCTCCAATTGGTGGAAGTGATGATGGTGGGGTAAATGTTATAGTGACTCTTCCTCCTAAGGAAATGGAAAAATTCCAAAGTCTCTTTTACAAGTTCCTCATTTGA 1335 0.4127 METYVQKAQSLPQDLKVIIHKTSMIFPSKKTEKKSVFLSNIDKVLNFDVETVHFFDANKDFPPKIVAEKLKKALEDALVVYEFIGGRLKVNSETKRLEIDCNEEGAGFVEASSEYKLNQIGDLVYPNPAFGQFVHKNKDFLKPGDVPLCVVQFTSLKCGGFVIGISTSHTIFDGLSFKTFLDNIAALAANKPLAVTPFHDRQLLAARSPPRVTFSHPELINLGNIPTGLESGLCMDSMQVLDFNIFRLTSDDINCLKEKAKADSTGRITGFNVITAHIWRCKALSGPYDPNRSSTILYAVDIRSRLNPALPKSYTGNAVLTAYATAKCKEIEEGLFSKLVEMVREGATRMSDEYARSIIDWGELYNGFPNGEVLVSSWWRLGLEQVEYPWGKPKYCCPALHHRKDIILLFSPIGGSDDGGVNVIVTLPPKEMEKFQSLFYKFLI 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1150 444 Gene3D - 236 442 IPR023213 -
Lal25g1150 444 Pfam Transferase family 16 440 - -
Lal25g1150 444 Gene3D - 13 220 IPR023213 -
Lal25g1150 444 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 442 - -
Lal25g1150 444 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 13 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1150 Lal-Chr25 14904393 14909046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1150 15 441 Monolignol Biosynthesis Gene Families AT5G48930 29.530 7.00e-51 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1150 K13065 - gmx:100780971 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1150 25 14904393 14909046 Lal25g1150 25 14904393 14909046 ECH
Lal17g0166 17 1009514 1010635 Lal25g1150 25 14904393 14909046 ECH
Lal7g1062 7 16703124 16704263 Lal25g1150 25 14904393 14909046 ECH
Lal14g1660 14 16859920 16861008 Lal25g1150 25 14904393 14909046 ECH
Lal20g1044 20 14233949 14235145 Lal25g1150 25 14904393 14909046 ECH
Lal18g0130 18 1024446 1025660 Lal25g1150 25 14904393 14909046 ECH