Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1142 ATGCAGAATCACTTTCTGAAGAGAGAAAAGGAAATCCCCGTCTCAGAATCTCGTTTATTCTTCTGCAACAGGCCAAAGAATATATACAAAGATTCAGATGATGGGCGACAACGGCTTTTGCTTGAACTGGAATTTGTCCAATGCCTTGCAAATCCCACCTACATTCACTATTTGGCTCAGAATCGATATTTTGAGGATGAAGGTTTCATTGAATACTTAAAGTATCTTCAGTATTGGCAGCGCCCTGAATACATTAAATTTATTATGTATCCTCATTCCCTTCATTTCCTTGAGCTTCTTCAGAATGCAAATTTCCGCAATGCAATGGCACATCCCAACACTAAGGAACTGGCACATAGACAACAATTCTACTTCTGGAAGAACTATCGGAACAATCGTCTAAAACACCTTTTACCGAGGTCACTTCCTGAACCTAGTGCCACACCTGCACTTCCTGCTCCTACCTCGACCTCAAACCAGATGCCCCTGCCTGCACTGCCACCGGTGCCAACTATAAATGTCACGGTGACAGCATCATCTGCTCGAGCTCCATCTCCAATACCATATGGCATACCCCCCGGATCTACTATTCCGAAAAATGAAATGAGAAATTCTGCAGTTGAGAAAAGGAAAAGAAAGTGA 642 0.4283 MQNHFLKREKEIPVSESRLFFCNRPKNIYKDSDDGRQRLLLELEFVQCLANPTYIHYLAQNRYFEDEGFIEYLKYLQYWQRPEYIKFIMYPHSLHFLELLQNANFRNAMAHPNTKELAHRQQFYFWKNYRNNRLKHLLPRSLPEPSATPALPAPTSTSNQMPLPALPPVPTINVTVTASSARAPSPIPYGIPPGSTIPKNEMRNSAVEKRKRK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1142 213 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 24 169 IPR008831 GO:0003712|GO:0006355|GO:0016592
Lal25g1142 213 MobiDBLite consensus disorder prediction 140 159 - -
Lal25g1142 213 Pfam SOH1 37 129 IPR008831 GO:0003712|GO:0006355|GO:0016592
Lal25g1142 213 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 24 126 IPR038089 -
Lal25g1142 213 MobiDBLite consensus disorder prediction 179 213 - -
Lal25g1142 213 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 24 169 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Lal25g1142 Med31 3.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1142 K15153 - gmx:100527879 301.982