Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1137 ATGAGTTTTCAAGATCTCCAAAGTGGGTCCAACCCATCAGCTCGCCGGAATCAGTCACCGTCCCAGGCCATAGTTTCTGGAATCTTCCAAACCAACACCGCCGTCGCTACTTTCCGGCGACTCGTTGATTCTGTTGGAACCGTTAAAGATACCCCTGAGCACCGTCAGAAGCTACACAATACAAGGCAGAAGATATTGCAGCTGGTGAAAGATACTTCTGCAAAGCTCAAATCCTTGACCGAATCTGATCGTTATACTCATGCCAAGGCTAATCATAAAATTGAAGATGCTAAGCTAGCAAGAGATTTTCAAACCACATTGCAAGAATTCCAGAAAGTGCAACAGCTTGCTTCGGAGCGCGAATCTACTTACACCCCTGCCGCCCTGACTTTACCTACAAGCTCGGGAGCTGGTGAAGAATCGAGTGTGGTAGATCGGGAAAGCCAACCTTTTATAACACAACAGAAGAGGCAAGAGATAGTTCTATTGGATAATGAAGTTTCCTTCAATGAGGCCATGATTGATGAAAGAGATCAGGGTATTAGAGAGATTGAAGAGCAAATTGGACAAGCAAATGAAATATTCAAAGACCTAGCTGTTCTGGTTCATGAGCAGGGTGTAGTTACTGATGGCTTACAATCAAATATTGATGCTTCTGCTGGTGCAACAACCCAAGCTAGAGTCCAGCTATCCAAGGCTTCCAAAAGTGTGAAATCGAGAACATCATGGTGTTGGTGGGTGCTTGTAATTTCTGTGGTGGTGCTGGTCATATTACTTCTTGTACTCCTTATTTAG 795 0.444 MSFQDLQSGSNPSARRNQSPSQAIVSGIFQTNTAVATFRRLVDSVGTVKDTPEHRQKLHNTRQKILQLVKDTSAKLKSLTESDRYTHAKANHKIEDAKLARDFQTTLQEFQKVQQLASERESTYTPAALTLPTSSGAGEESSVVDRESQPFITQQKRQEIVLLDNEVSFNEAMIDERDQGIREIEEQIGQANEIFKDLAVLVHEQGVVTDGLQSNIDASAGATTQARVQLSKASKSVKSRTSWCWWVLVISVVVLVILLLVLLI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1137 264 Pfam Syntaxin-like protein 25 124 IPR006011 GO:0016020
Lal25g1137 264 SMART tSNARE_6 166 233 IPR000727 -
Lal25g1137 264 Gene3D - 7 129 - -
Lal25g1137 264 SUPERFAMILY t-snare proteins 18 226 IPR010989 GO:0016020|GO:0016192
Lal25g1137 264 MobiDBLite consensus disorder prediction 1 20 - -
Lal25g1137 264 SMART SynN_4 8 122 IPR006011 GO:0016020
Lal25g1137 264 Gene3D - 164 264 - -
Lal25g1137 264 Pfam SNARE domain 214 259 IPR000727 -
Lal25g1137 264 CDD SNARE_Qa 174 232 - -
Lal25g1137 264 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Lal25g1137 264 PANTHER SYNTAXIN 13 263 IPR045242 -
Lal25g1137 264 PANTHER SYNTAXIN-22-LIKE 13 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1137 Lal-Chr25 14722394 14733322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1137 1 250 SNARE and Associated Proteins AT5G46860 55.859 1.11e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1137 - K08488 gmx:100787141 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1137 25 14722394 14733322 Lal25g1137 25 14722394 14733322 ECH