Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1122 ATGAATTCTGATCCAAGTTCACGATATGTTCGGTATGATGAGATGTTGGGGAAAGGAGCATTCAAGACTGTTTTTAAAAATCAATTTTTAATGGTATTGATTCGGAAATTTAGAGGGTGTCTGTCAGCTCAATCGGCGTTTGATGAAGTAAATGGGATAGAGGTTGCCTGGAACCACATCAGTATTGAGGATGTTTTGCAGTCACCACAGCAGTTGGAAAGATTATATTCCGAGGTCCATCTCCTCAAATCATTGAAGCATGAAAATATCATTAAGCTTTATGATTCTTGGGTGGATGATAAGAACCAGACCATCAACATGATTACCGAGTTATTTACCTCTGGGAATTTGAGGCAGTATAGGAAGAAACATAAGAATGTTGATATGAAAGCCATCAAGAATTGGGCGAGGCAGATTCTTCGAGGCTTATGTTATCTGCATAGCCGCAGTCCTCCAATAATTCATAGGGATCTTAAATGTGATAATATTTTCGTTAACGGCAATGATGGACATGTTACAATTGGAGATCTTGGATTGGCAATTGTCATGCAGCAGCCTGCTGCTCGAAGTGTTATTGGTACACCAGAGTTCATGGCCCCAGAGCTATATGATGAAGAATATAATGAACTTGTTGATATATATTCCTTTGGCATGTGTATGCTGGAAATGATCACCTGTGAGTACCCATACAGTGAATGCAAAAATCCCGCCCAAATATATAAGAAAGTTACCTCTGGCATAAAGCCTGCTGCTCTTTCCAAAGTAAATGATCCGGAAATGAAGCGATTTATTGAGAAGTGTCTAGTTCCAGCTTCTATGAGATTACCTGCTTCTGAACTATTGAAACACCCATTCCTTGCAACGGAAAACACAAAGGAGAGAAATCATGATATGCTACACCTTCCTAATAATCCCCTCGCCAAGTTGGTCAATCCACCAATATCTGAGCCTCATCCAATGGAGATAGACTCAAACTTCAGGCATACTTCATCTAGCTCCTCTGTTAGAAGAACTGAAGAAGCTTCTCAAGTTTCAACTTTTGATCTCGTTAGGATGACTGAGAATAATGAATTTAGGTTAAGAGGAGATAAAGATGGTGAAAGTACAATTTCGCTTATGCTGCGAATTGCAGATACACATGGTCGAGCAAGGAATATCCATTTTCCATTCTTTATCGAGTCTGATACTGCAATTTCAATTGCTGCGGAGATGGTGGAACAGCTGGAACTCGCAAGTGAGGACGTAGCTGTCATTGCTGAGCTAATACACGACATGATTGAGAACCTTGTGCCCAACTGGCAACCCTCTTGTTGTGACCTTCCATTTCGAACAGATCATTTATGCCGGTCTTCTGATGTTCAGAATGGTGAAATAGGAAGTTGCCAATGGCCACCACAGTCAAGTGGTTTTGATACAAAGGCAGCCGACGGGGATTTTGTTCTTTCAAAGCACGTTGATGGGGACGATCAGGAGAAGCAAGAATCTGTTTTGTCTGATATTTCAGCAGAGTATGGGGTTCCAGTTACCTCAGATTCTAAAGCTTTAGAGCATGGTTTTTCAATTCTTGATGAATGCTGCAGAGTATCCAATGGCTTCAATTGCAATTCAGATTTCATGTTTTGTGGTCAAGATGATGGATACAAGAATAAAACTAATCATTCAGAGAATCACTCAGCAAGCTCTTTGATGGATTCATGTTTCAGTGCATCAGAAATATTTGACATGTCAAGCATATGTTCGCTTACTCTAGCTGACAAAGATCATTCGGACGATGAACTGCAGTCGGAGCTTGATGCAATAGATATACAGTATCAACAATGCCTTCATCAGCTTGATAAGATGAGGGAAGAAGCCATAGAAAATGCCAAAAGGAAATGGATAACAAGGAAGAAAATATCAGTCATGTGA 1908 0.4025 MNSDPSSRYVRYDEMLGKGAFKTVFKNQFLMVLIRKFRGCLSAQSAFDEVNGIEVAWNHISIEDVLQSPQQLERLYSEVHLLKSLKHENIIKLYDSWVDDKNQTINMITELFTSGNLRQYRKKHKNVDMKAIKNWARQILRGLCYLHSRSPPIIHRDLKCDNIFVNGNDGHVTIGDLGLAIVMQQPAARSVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEMITCEYPYSECKNPAQIYKKVTSGIKPAALSKVNDPEMKRFIEKCLVPASMRLPASELLKHPFLATENTKERNHDMLHLPNNPLAKLVNPPISEPHPMEIDSNFRHTSSSSSVRRTEEASQVSTFDLVRMTENNEFRLRGDKDGESTISLMLRIADTHGRARNIHFPFFIESDTAISIAAEMVEQLELASEDVAVIAELIHDMIENLVPNWQPSCCDLPFRTDHLCRSSDVQNGEIGSCQWPPQSSGFDTKAADGDFVLSKHVDGDDQEKQESVLSDISAEYGVPVTSDSKALEHGFSILDECCRVSNGFNCNSDFMFCGQDDGYKNKTNHSENHSASSLMDSCFSASEIFDMSSICSLTLADKDHSDDELQSELDAIDIQYQQCLHQLDKMREEAIENAKRKWITRKKISVM 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1122 635 Pfam Protein kinase domain 52 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1122 635 Gene3D Phosphorylase Kinase; domain 1 1 110 - -
Lal25g1122 635 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 370 426 IPR024678 GO:0004674|GO:0005524
Lal25g1122 635 PANTHER WNK KINASE 3 630 - -
Lal25g1122 635 MobiDBLite consensus disorder prediction 318 339 - -
Lal25g1122 635 Gene3D - 368 443 - -
Lal25g1122 635 Gene3D Transferase(Phosphotransferase) domain 1 112 294 - -
Lal25g1122 635 CDD STKc_WNK 8 286 - -
Lal25g1122 635 SMART serkin_6 10 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1122 635 SUPERFAMILY Protein kinase-like (PK-like) 13 330 IPR011009 -
Lal25g1122 635 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 3 630 - -
Lal25g1122 635 MobiDBLite consensus disorder prediction 324 339 - -
Lal25g1122 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Lal25g1122 635 ProSiteProfiles Protein kinase domain profile. 10 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1122 635 Coils Coil 597 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1122 Lal-Chr25 14572166 14575750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1122 4 634 MAP Kinase Kinase Kinase AT5G41990 51.981 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lal25g1122 Pkinase 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1122 K08867 - gmx:100783717 822.387