Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1116 ATGAATTTCATCGATAACGACCTAGACGGCATCGATCTCGACCCTTCCGATTTCTCCTCCTCCGTCCCTCTCAAAAAAGTCCCAAACGGCGACGTTTTTGAAGCCTCACGCGCCGGCGACGTCGACCGCCTCCGCTACCTCCTTGAATCCGGCGTCAACGTCAATGCTCGCGACCACTGGGACTCCGTCGCTCTTTACTATGCCTGTCTCGCCGGCCACCTCGACGCCGCCCGTATGCTCCTTGAGAATGGTGCTATTTGCTCTGAACACACCTTCGACGGTGACCGCTGTCACTACGCTGCGCTAAATTTGAAGGTACGGAAGCTACTAAAGGCATTCGAGGCACGCCCTCCGCCGTTGGGTCCTTTGCCCGCTGCATTGCGTGACACTTTCTTGTCCTCCGCCGCTAACCGCTGTTACTCGGAGGTCGCTGATCCTCAGTTTCAAATTTCAGGTATTTCATCCACTCAGGGGTCAAGTGGCGACTACTTTCCTCCAGATGTGACTTTTATTGTTCAAGGAAGACCGATTGAAGCTCACAGAGTCATATTAAGTGCAAGATCACCATTTTTCAAGAAAAAGTTTGAGACTGATTGGAAACATCGCAGTGAAGTAAGGTTGTCACGGGAAAAGTTGTCATACCCTGCACTTTATAGCCTCATACACTTCTTTTATTCAGACAGACTAGAGATTGCCGTGGATGACATGGAAGATCTTGTAAGAATCTGCAAAGTTTGCAAATGCGAATCACTACAGAAAATTGTGGAGAAAGAAGTAATTCATCAAAAATATGCCGAGTATAAAGCATTGAGAGATGTTGATAATTCTCAGAAAAGGTATGTGTTACAGGGTCTGTCTCTTCCTGAAGAAGACCGGCTTCCTGCAGCCTTACGTCGAATCCTTCTGACTGCCCTTGCAAATTCCACCCATGAAAATGGTCAAGCTGATGGGATTGACAAATTGGTATCTGGGATGGGTATCATGCACATAGCCAAACCCGTAGATGATCTTGCCGATGTTTGTGTAAGAGTGGATACAAAAGTTTTTCGCTGCCATCAAGTTATTCTAGCATCAAGGTCAGAATATTTCAAAGCTAGATTGTCACGTATGAAGGACTTCCATGAAGGGAAGGATGAGTTATCTGTTGATTTCCTTCCTTGTCTTGAAGAACACGACTTAAGCATGGACGCATTTGAGAAAGTGGTTGAATATATGTACACCGATGGTTTGGAGAAAATAGACCCAGATCAGGCTGAGGAAATGTTTGATGTTGCTTCTAGATACTTATTATTTCCTCTTAAGCGTGCCGTGGCTGATGTATTGTTGCCACACTTGGAAATAGTGTCGCCTGAAGAACTCTGCCATTGGCTAATACTAGCTGACATGTATGCTGTCGTCAAGATTCGGGAATATTGTCTAGATACTATAGCTTGCAATTTTGAAACATTTGCTGATACTAAAGAATTCCGGGCAATGCTATTGACATTGCCTCCACCATCCGGAGACTCTTCTCTTCGGACCACTGTCCCAAGTGTTCCTGGTTCTTCTCTAAACACCGACCAAGGAAACCTTCTCGATGATTTACGTGAAAAATGGCTTGAAATTGAAGCTGCCGAGCTTGACCAAAGAGATGAGAGTGCACTGCAGTTCGATCACCGCCTTAAGATGCTTCTGCATGTTGCAGAGCAAGAAAACTCAGATGCACAAAAGGAACCATAG 1719 0.4578 MNFIDNDLDGIDLDPSDFSSSVPLKKVPNGDVFEASRAGDVDRLRYLLESGVNVNARDHWDSVALYYACLAGHLDAARMLLENGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLGPLPAALRDTFLSSAANRCYSEVADPQFQISGISSTQGSSGDYFPPDVTFIVQGRPIEAHRVILSARSPFFKKKFETDWKHRSEVRLSREKLSYPALYSLIHFFYSDRLEIAVDDMEDLVRICKVCKCESLQKIVEKEVIHQKYAEYKALRDVDNSQKRYVLQGLSLPEEDRLPAALRRILLTALANSTHENGQADGIDKLVSGMGIMHIAKPVDDLADVCVRVDTKVFRCHQVILASRSEYFKARLSRMKDFHEGKDELSVDFLPCLEEHDLSMDAFEKVVEYMYTDGLEKIDPDQAEEMFDVASRYLLFPLKRAVADVLLPHLEIVSPEELCHWLILADMYAVVKIREYCLDTIACNFETFADTKEFRAMLLTLPPPSGDSSLRTTVPSVPGSSLNTDQGNLLDDLREKWLEIEAAELDQRDESALQFDHRLKMLLHVAEQENSDAQKEP 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1116 572 CDD BACK 449 492 - -
Lal25g1116 572 SUPERFAMILY POZ domain 335 444 IPR011333 -
Lal25g1116 572 ProSiteProfiles BTB domain profile. 338 414 IPR000210 GO:0005515
Lal25g1116 572 Gene3D Potassium Channel Kv1.1; Chain A 332 477 IPR011333 -
Lal25g1116 572 ProSiteProfiles Ankyrin repeat profile. 35 59 IPR002110 GO:0005515
Lal25g1116 572 Gene3D - 10 157 IPR036770 -
Lal25g1116 572 Gene3D Potassium Channel Kv1.1; Chain A 159 282 IPR011333 -
Lal25g1116 572 Pfam Ankyrin repeats (many copies) 34 81 IPR002110 GO:0005515
Lal25g1116 572 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 8 561 IPR044515 -
Lal25g1116 572 SUPERFAMILY Ankyrin repeat 34 110 IPR036770 -
Lal25g1116 572 SUPERFAMILY POZ domain 165 259 IPR011333 -
Lal25g1116 572 Pfam BTB/POZ domain 166 262 IPR000210 GO:0005515
Lal25g1116 572 Pfam BTB/POZ domain 336 441 IPR000210 GO:0005515
Lal25g1116 572 ProSiteProfiles BTB domain profile. 166 233 IPR000210 GO:0005515
Lal25g1116 572 CDD BTB_POZ_ZBTB_KLHL-like 337 428 - -
Lal25g1116 572 SMART BTB_4 338 445 IPR000210 GO:0005515
Lal25g1116 572 SMART BTB_4 166 263 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lal25g1116 BTB 1.4e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1116 K10520 - qsu:111999987 906.36