Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1097 ATGTGGTTACAAAAGAATAGTGGTTGGGATAAGAAAGATGGTGTGAATGGAATAGTGGCAGTGGCAATAGACAAAGATAAAGGAAGCCAAAATGCATTGAAATGGGCCATTGATCATCTTCTTACAAGAAATAACACTGTAGTTCTTATCCATGTCAATGCTAAACATGCTTCTATTACAACCCCAAAACCATATTTTGTAATGACTTGGGTTGTTGCAGAGGCTAAAGGTTTTGGTATTAGTGAGCACAATTCATTGGTTTCCAAAGACCCTGATGATCAAACTAAAGAAATTTTCCGTCCATATCGTGTCTTCTGTGCAAGAAAAGATTTACACTGCAAGGATGTTGTACTAGAAGATGGAGATGTAGCCAGAGCTTTAATTGAATACACTTCTCACACAGCAATTGAGCATTTGGTTATAGGCTCTTCCAATAAAACTGGTTTTCTTAGATTCAAGGGATCAGATATTCCAGGAACATTATCAAAAGGGGCACCAGATTTTTGTACAATATATGTTGTTTCTAAGGGAAAGATTCAATCAATGAGATCTGCTTCTCGTCCTGTTCCATTTGTTTCCCCTCTACTTACTCTTAACTCTGACCCACCACGTGTGCCTCTCTCTGGTGCTACTGTTAAAGGAGAAAGGAGACCTTTGGAAGTTCCTCCACGCAGATCACACGATGGAACAACAGATTCTTTCAGGTCACCATTCACTAGGAAAGGAATGGCAGAGAGATATGTGGAAATTTCCACACCAGTTGATAGTGATATAACATTTGTAAGCTCAGGAAGATCAAGCATAGACAAATTGTTCCCTACATTAACTAACAATAATACTTCAGAATCTGGCTTTTCCAATCCTAGACTATCATATAGTTCAGATACAGATGCAAACTATAGTTTTGAGTCATTGAATTTTGGAAGGAGATCTATTGATATCACCTCTCCTGATCACTCTTTCTCTAGTGATGGCTTCTCATCGTCGTCGCAAACTACGGATGATGTAGAAGCTGAAATGAGGAGACTGAAGTTGGAGTTGAAGCAAACTATGGAAATGTATAGCACAGCATGTAAAGAAGCACTCTCAGCACAGCACATGGCAGTAGAACTCCAAAGGTGGAAAATAGAGGAAGAGAAGAGAATGGAAGAAGCAAGGATGGCTGAAGAAGCTGCGTTGGCAATGGCAGAAAGGGAAAGGGCAAAATCAAAAGCAGCTATTGAAACTGCTGAAGCACAAAAGAGGATAGCAGAATTGGAAGCACAGAAGAGACTTAATGCAGAAATGAAAGCACTTAAAGAATCAGAAGAGAGAAGAAAAGCAATTGATGCTTTAGCAAACAAAGATGTAAGGTATAGAAGATATTCAATTGAGGAGATTGAAGAAGCCACAAGTTTTTTTGCAGAGGCCTTGAAAATTGGTGAAGGGGGTTATGGTCCAGTTTATAAGTGCCTTTTGGATCATACACCTGTTGCAGTGAAGGTTTTGCGTCCTGATGCAGCACAAGGAAGGTCACAATTTCAAAGAGAGGTTGAGGTACTAAGTTGCATAAGGCATCCAAACATGGTTCTTCTCCTAGGAGCTTGTCCAGAATATGGTTGTCTTGTTTATGAACACTTATCACGCGGAAGCTTAGATGATGTCCTTTTCTGTAGAGGAAATAGTCCTGCACTTCCATGGCAACTTAGGTTCAAGATTGTGTGTGAGATTGGAACTGGTTTATTGTTCCTACACCAAACAAAACCTGAACCTCTTGTCCATAGGGACTTAAAACCAGCAAACATATTGCTTGATAGAAACTATGTAGCAAAGATAAGTGATGTAGGTTTGGCTAGGTTAGTTCCACCTTCTGTTGCTAACAATGTTACTCAATATAGAATGACTTCAGCTGCTGGAACTTTCTGTTATATTGATCCTGAGTATCAACAAACAGGAATGTTGGGTGTGAAATCTGATATCTATTCACTTGGTATCATTTTCCTACAAATTTTGACAGCAAGACCACCAATGGGTTTAACACATCATGTTGAAAGAGCTATTGAGAAGGGTAAATTTGTTGATATGCTTGATTCAAAAGTGTGTGATTGGCCAATAGATGAAGCATTAACTCTTGCTAAGATTGCAATCAAATGTGCTGAATTAAGGAGGAAAGATAGGCCTGATCTTGGTAAAGAAGTTCTACCAGAATTAAACAGGTTAAGAGAACTTGCTGAAAGTAATGATCAACATTCTGTCTTGAATGGCTTTATTAGCCCATCAAACCAAAGCCAAGTTTCTGTTCAGGATGGAGGTATTTCTTCACATCCTTCCTCTGGGGAAAGCTCATGA 2328 0.3918 MWLQKNSGWDKKDGVNGIVAVAIDKDKGSQNALKWAIDHLLTRNNTVVLIHVNAKHASITTPKPYFVMTWVVAEAKGFGISEHNSLVSKDPDDQTKEIFRPYRVFCARKDLHCKDVVLEDGDVARALIEYTSHTAIEHLVIGSSNKTGFLRFKGSDIPGTLSKGAPDFCTIYVVSKGKIQSMRSASRPVPFVSPLLTLNSDPPRVPLSGATVKGERRPLEVPPRRSHDGTTDSFRSPFTRKGMAERYVEISTPVDSDITFVSSGRSSIDKLFPTLTNNNTSESGFSNPRLSYSSDTDANYSFESLNFGRRSIDITSPDHSFSSDGFSSSSQTTDDVEAEMRRLKLELKQTMEMYSTACKEALSAQHMAVELQRWKIEEEKRMEEARMAEEAALAMAERERAKSKAAIETAEAQKRIAELEAQKRLNAEMKALKESEERRKAIDALANKDVRYRRYSIEEIEEATSFFAEALKIGEGGYGPVYKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHLSRGSLDDVLFCRGNSPALPWQLRFKIVCEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVANNVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVERAIEKGKFVDMLDSKVCDWPIDEALTLAKIAIKCAELRRKDRPDLGKEVLPELNRLRELAESNDQHSVLNGFISPSNQSQVSVQDGGISSHPSSGESS 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1097 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Lal25g1097 775 Gene3D HUPs 18 161 IPR014729 -
Lal25g1097 775 SUPERFAMILY Protein kinase-like (PK-like) 451 722 IPR011009 -
Lal25g1097 775 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 10 775 - -
Lal25g1097 775 MobiDBLite consensus disorder prediction 203 237 - -
Lal25g1097 775 CDD STK_N 18 177 - -
Lal25g1097 775 MobiDBLite consensus disorder prediction 747 775 - -
Lal25g1097 775 Gene3D Transferase(Phosphotransferase) domain 1 540 751 - -
Lal25g1097 775 Coils Coil 333 353 - -
Lal25g1097 775 Pfam Universal stress protein family 19 152 IPR006016 -
Lal25g1097 775 Pfam Protein kinase domain 470 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1097 775 ProSiteProfiles Protein kinase domain profile. 467 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1097 775 Coils Coil 379 439 - -
Lal25g1097 775 Gene3D Phosphorylase Kinase; domain 1 445 539 - -
Lal25g1097 775 PANTHER OS02G0152300 PROTEIN 10 775 - -
Lal25g1097 775 SMART serkin_6 467 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1097 775 MobiDBLite consensus disorder prediction 217 231 - -
Lal25g1097 775 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1097 Lal-Chr25 14281908 14290006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1097 1 760 Receptor kinase-like Gene Family AT1G78940 54.231 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal25g1097 Pkinase 4.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1097 - - gmx:100779981 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g1522 8 19538439 19543916 Lal25g1097 25 14281908 14290006 LSH