Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1073 ATGGAGAATAGAGTTGAGAGTCTAACAGGTAGTAGTAATTCTACCATGTGGAGGAGGAATCATAGTATAGATGTTTTCTCAACATCTGAACGTGAAGATGATGAAGAAGCTCTTAAATGGGCTGCAATTGAGAGACTTCCAACGTTTCTTCGAATTCGGAGAAGTATACTCAAAACTGAAGGAGGAGAAGGAAGAGAAGTTGATATCAAAAAACTTGGATTAACAGAGAGAAAGATTCTTCTAGATAGACTTGTCAAAACTGCAGAAGAAGATAATGAGAAGTTCTTGTTGAAACTCAGAGAAAGGATGGACAGAGTTGGACTTGATATTCCAACAATTGAAGTAAGATTTGAGCATATAAATGTGGAAGCACAAGTTTATGTTGGAAGTAGAGCATTGCCTACACTATTAAACTTCTATGCCAATGTGGTAGAGGGGTTCTTAAATTGGCTTCACATAATTCCAAGCCTAAAGAAACCCTTACATATCCTACAAAATGTTAGTGGAATCATAAAGCCTAGAAGAATGACATTGCTTTTAGGACCCCCAGGCTCTGGAAAAACCACTTTGTTGTTGGCATTGGCTGGAAAACTTGGTAAAGATTTGGAACAATCTGGAAGAGTATCATACAATGGGCATGGGCTGGAAGAGTTTGTGGCACAAAGGACATCAGCTTATATAGGTCAACATGATAACCACATTGGAGAAATGACTGTCAGAGAAACACTAGCTTTCTCAGCAAGATGTCAAGGAGTTGGGCAGAATTACGAGATATTGACTGAACTACTAAGAAGAGAGAAGCAAGCAAAGATTAAACCAGATTCTGATATTGATGCCTATATGAAGGCGGCTGCACTAGAAGGACAGAAAACGAGCTTGGTCACTGACTATATTCTTAAGATTTTGGGACTTGAAATCTGCGCTGACATTATGGTAGGAGATGGAATAATAAGAGGAATCTCGGGAGGCCAGAAAAAGCGAGTCACAACAGGGGAGATGCTTGTTGGACCTATAAGGGTGTTATTCATGGATGAGATATCAACTGGTTTGGACAGTTCCACAACTTATCAAATAATCAATTCAATCAGGCAATCCATCCACACTCTCAATGGAACTGCACTTGTCTCTTTGCTGCAGCCAGCACCAGAAACTTTCGAACTATTTGACGATATAATAATCCTAACCGATGGGCAAATTGTTTACCAGGGACCCAAAGAAAATGTACTTGAGTTTTTTGAATCAATGGGATTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGATTTCTTACAAGAAGTGACATCAAGGAAAGATCAATGGCAGTATTGGGCACGTAAAGACGAACCGTATAGCTTTGTCACTGTCAAAGACTTTGTCGAAGCCTTCCAGTCATCTCGTGTAGGTCAACAACTTGGAGACGAGCTGGCCAATCCTTTTGACAAGACTAAATCCCATCCTATTGCCTTAACCACCAAGAAGTATGGTGTTTGCAGGAAGGAGCTTCTAAGGGCTTGTGCTGGCAGAGAATTTTTGCTTATGAAGCGAAATTCATTTGTCTACATATTCAAAGTCACAAATCTTATTTATTTAGCTATCTTGACAACAACATTATTTCTACGAACTAAGATGCATCGAGATACCAAACAGGATGGTGGAACTTTCATGGGTGCTCTATTCTTCGCAGTCATCGTAGCTATGTTCAATGGAATATCAGAGCTAAATATGACCATCATGAAACTTCCTGTCTTTTTCAAGCAAAGGGACTTTCTTTTTTACCCTTCATGGGCTTATTCTCTTCCAACATGGATCCTCAGAATACCAATATCCATAATAGAGGTTGCCATTTGGGAAGGAATCTCCTACTATGCCATTGGCTTTGATCCTAATATTGGAAGGCTTTTTAAGCAGTACCTCGTACTCCTATGCGTTAACCAGATGGCTTCTGCAATGTTTCGGTTGATGGCAGGATTAGGAAGGGATGTTATAGTTGCTAACACTGTTGGTTCATTTGCATTACTTACAGTTTTGGTTTTGGGTGGATTTGTGATTTCAAGAGATGATGTTCCCAAATGGTTTCTATGGGGTTACTGGTCCTCACCTCTAATGTATGGACAGAATGCTATTGCTGTGAATGAATTTCTTGGGCATAGTTGGAGAAAGGTTCTTCCTAATTCCACTGAAACACTGGGAATTTTGGTACTGAAATCTCGTGGATTTTTCGCACAAGCTTACTGGTATTGGATTGGCGTAGGAGCTTTGATTGGTTATGCTTTTCTATTTAATTTTTTGTTCACATTGGCTTTGCAATATCTCAATCCAATTAGGAAGGCTCAAGCAGGGCTATCCCATGAGCAATTACTTGAGAGGAATGCTTCAACAGGTGATGAGCTTATTCAGTTAACGACACGAAAGAGCTCTTCTGAAACAAAGATGGGAGAAGAAGCAGGTCTATCATCCAGATCTTTCTCTGGAAGATTTAGTAATGATCAAAATACTAAAAGTGGAAGAAGGGGCATGGTTCTTCCTTTTCAACCTCTATCCCTCACTTTTGATGAGATCAAATATTCTGTAGATATGCCGCAGGAAATGAAAAGTAGAGGTGTTTTCGAGGATCGTCTTGAACTTTTGAAGGGTGTTAGTGGTGCTTTTAGGCCTGGAGTACTAACAGCTTTGATGGGTGTAAGTGGTGCCGGAAAGACTACTTTAATGGATGTTTTAGCTGGAAGGAAAACTGGTGGATATGTCGAAGGAAGAATCACAATATCTGGGTACCCAAAGATCCAAGAAACATTTGCTCGCATATCAGGATATTGTGAACAATTTGATATCCATTCACCCCATGTTACAGTTTATGAATCTTTGCTATATTCTGCTTGGCTTCGATTACCCCCTGAAGTTGATAATGCAATTAGAAAGATGTTCATTGAGGAAGTTATGGAGCTTGTGGAGCTTAATTCGTTAGGAGATGCACTTGTTGGATTGCCAGGCGAGACTGGACTTTCAACTGAGCAGCGCAAGAGGCTTACAATTGCGGTTGAACTTGTAGCCAACCCTTCAATAATATTCATGGATGAGCCAACCTCTGGTCTTGATGCTAGATCAGCTGCAATTGTAATGAGAACTGTAAGGAACACTGTGGACACAGGACGTACCGTGGTTTGCACGATCCACCAGCCAAGTATTGATATATTTGACGCCTTTGATGAGCTGCTGCTACTGAAATCGGGAGGGGAACAGATATATTCCGGTCCATTAGGCCGCCACTGCGCGCAGCTGATCCGTTACTTTGAGGCCATTGAAGGAGTTCCTAAGATCAAAGATGGTTATAATCCTGCAACATGGATGTTGGAAGTTACATCAGCAGGAACAGAAGCAAATCTTAAGAGTCCAAAGTTACATGATTACGAAATATTAAGATGCAAATATTTCTTATCTTATGATACTTCCGAACTCCAAATTTTCAGGAGAAACAAACAATTGATCGAAGAGCTTAGTACACCACCGCAAGGTTCAACAGATTTATACTTTGATAGTCAGTACTCACAGACCTTCCTGGCACAATGCAAAGCTTGCCTATGGAAGCAACATTTATCGTACTGGCGAAACACGTCATATACCGCAGTTAGACTCCTATTTACAACAATAATAGCTATATTGTTTGGGATGATTTTTTGGAACATTGGCCTGAAAAGAAGAAAAGAGCAAGATCTTTTCAATGCAATGGGATCAATGTATGCCTCTGTTATCTTCATTGGAGTACAAAATGGTGCCTCAGTGCAGCCTGTAATAGCAGTTGAGAGAACAGTCTTCTATAGAGAGAGAGCTGCAGGAATGTATTCAGCTTTGCCATATGCTCTTGCACAGGTTATTATTGAGCTTCCCCATGTCTTGGTTCAGACTATAATATATGGGATTATAGTATATGCCATGATGGGATTTGAGTGGATAACATCAAAGTTCCTATGGTATCTCTTCTTCATGTACTTCACATTATTGTACTTCACCTTCTATGGTATGATGACCATGGCTATCTGTCCGAACCCACACGTAGCAGGCATACTATCTAGCACATTCTACGCAGTTTGGAATCTTTTCTCCGGCTTTGTCATTCCTTTATCAAGGATACCAATATGGTGGAAGTGGTACTATTGGATTTGTCCTGTTGCATGGACATTATATGGATTGGTAACATCACAATTTGGAGATCTCATGGATCAACTTGATAATGATCAAAGGGTTGAAGAATTTGTGAGGAGTTACTTTGGATTTAAACATGATTTTCTAGGAGTTGTTGCAGTTGTTGTAGCTGGATTCTCAGTGTTGTTTGCTCTTATCTATGCCTTTGGAACCAAAGCATTCAACTTCCAAAAAAGATGA 4374 0.401 MENRVESLTGSSNSTMWRRNHSIDVFSTSEREDDEEALKWAAIERLPTFLRIRRSILKTEGGEGREVDIKKLGLTERKILLDRLVKTAEEDNEKFLLKLRERMDRVGLDIPTIEVRFEHINVEAQVYVGSRALPTLLNFYANVVEGFLNWLHIIPSLKKPLHILQNVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLGKDLEQSGRVSYNGHGLEEFVAQRTSAYIGQHDNHIGEMTVRETLAFSARCQGVGQNYEILTELLRREKQAKIKPDSDIDAYMKAAALEGQKTSLVTDYILKILGLEICADIMVGDGIIRGISGGQKKRVTTGEMLVGPIRVLFMDEISTGLDSSTTYQIINSIRQSIHTLNGTALVSLLQPAPETFELFDDIIILTDGQIVYQGPKENVLEFFESMGFKCPERKGVADFLQEVTSRKDQWQYWARKDEPYSFVTVKDFVEAFQSSRVGQQLGDELANPFDKTKSHPIALTTKKYGVCRKELLRACAGREFLLMKRNSFVYIFKVTNLIYLAILTTTLFLRTKMHRDTKQDGGTFMGALFFAVIVAMFNGISELNMTIMKLPVFFKQRDFLFYPSWAYSLPTWILRIPISIIEVAIWEGISYYAIGFDPNIGRLFKQYLVLLCVNQMASAMFRLMAGLGRDVIVANTVGSFALLTVLVLGGFVISRDDVPKWFLWGYWSSPLMYGQNAIAVNEFLGHSWRKVLPNSTETLGILVLKSRGFFAQAYWYWIGVGALIGYAFLFNFLFTLALQYLNPIRKAQAGLSHEQLLERNASTGDELIQLTTRKSSSETKMGEEAGLSSRSFSGRFSNDQNTKSGRRGMVLPFQPLSLTFDEIKYSVDMPQEMKSRGVFEDRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYVEGRITISGYPKIQETFARISGYCEQFDIHSPHVTVYESLLYSAWLRLPPEVDNAIRKMFIEEVMELVELNSLGDALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARSAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKSGGEQIYSGPLGRHCAQLIRYFEAIEGVPKIKDGYNPATWMLEVTSAGTEANLKSPKLHDYEILRCKYFLSYDTSELQIFRRNKQLIEELSTPPQGSTDLYFDSQYSQTFLAQCKACLWKQHLSYWRNTSYTAVRLLFTTIIAILFGMIFWNIGLKRRKEQDLFNAMGSMYASVIFIGVQNGASVQPVIAVERTVFYRERAAGMYSALPYALAQVIIELPHVLVQTIIYGIIVYAMMGFEWITSKFLWYLFFMYFTLLYFTFYGMMTMAICPNPHVAGILSSTFYAVWNLFSGFVIPLSRIPIWWKWYYWICPVAWTLYGLVTSQFGDLMDQLDNDQRVEEFVRSYFGFKHDFLGVVAVVVAGFSVLFALIYAFGTKAFNFQKR 1457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1073 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 847 1099 IPR003439 GO:0005524
Lal25g1073 1457 CDD ABCG_PDR_domain2 844 1082 IPR034003 -
Lal25g1073 1457 SMART AAA_5 173 398 IPR003593 -
Lal25g1073 1457 SMART AAA_5 884 1076 IPR003593 -
Lal25g1073 1457 PANTHER ATP-BINDING CASSETTE TRANSPORTER 11 1457 - -
Lal25g1073 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 421 IPR027417 -
Lal25g1073 1457 Pfam ABC-2 type transporter 379 430 IPR043926 GO:0140359
Lal25g1073 1457 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 11 1457 - -
Lal25g1073 1457 Pfam Plant PDR ABC transporter associated 717 778 IPR013581 -
Lal25g1073 1457 Gene3D - 154 454 IPR027417 -
Lal25g1073 1457 Pfam ABC transporter 164 346 IPR003439 GO:0005524
Lal25g1073 1457 Pfam ABC transporter 875 1027 IPR003439 GO:0005524
Lal25g1073 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 870 1085 IPR027417 -
Lal25g1073 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 148 421 IPR003439 GO:0005524
Lal25g1073 1457 Pfam ABC-transporter N-terminal 88 139 IPR029481 -
Lal25g1073 1457 MobiDBLite consensus disorder prediction 801 834 - -
Lal25g1073 1457 Pfam ABC-2 type transporter 1186 1399 IPR013525 GO:0016020|GO:0140359
Lal25g1073 1457 Pfam ABC-2 type transporter 500 712 IPR013525 GO:0016020|GO:0140359
Lal25g1073 1457 Gene3D - 862 1096 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1073 Lal-Chr25 14042046 14051322 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1073 K08711 - gmx:100810505 2418.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1073 25 14042046 14051322 Lal21g0352 21 2398858 2406568 PCT