Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1046 ATGGCTAGAGAAGTCATTGCTTCTGCGTCACCTACATCTCCATCAGCTGCTTCTTTCGAGTATGAGATCTTGGATGGTAATGCTGAAATCCTTAAAACTGTTAGATCCTCATCCAGTCACGCAAGTTCATGGATTGAATCTGAAAGGTTGAAGCTCAGACACAGAATTGGCCGGGGACCCTTTGGTGATGTTTGGCTAGCAACGCTTCATCAATCGACTGAAGATTATGATGAGTACCATGAAGTTGCTGTTAAGATGTTATATCCAATCAAAGAGGATCATATGAAGATTGTATTGGACAAATTCAATGAATTATATTTTAAATGCCAAGGAGTTTCTAGTGTTTGCTGGCTACATGGAATTTCAGTCTTAAATGGAAGGATATGCATCATTATGAATTTGTACGAGGGTTCAATCGGTGACAAGATGGCTAGACTAAGAGAAGGAAGAATTTCGTTGCATGATGTTTTGAGGTACGGAATCAATTTGGCTGAGGGTATTCTGGAACTTCACTCTACGGGGCTCCTCATTCTCAACCTTAAACCATCTAATGTTCTTCTCGATAATAATGACCAAGCAATTTTGGGAGATGTTGGTATTCCCAATATTTTGCTTGGCACCTCATTCCTAAGTTCAGATATGGCTCAGAGGCTTGGAACTCCGAATTACATGGCTCCAGAACAACAGGATCCAGAGGTCAGAGGCCCTATATCGTTTGAAACAGATTCTTGGGGATTCGGGTGCACCATTGTTGAAATGTTGACTGGTATTCAACCTTGGTATGGATGTCCTGTTGGTAGAATATATCAATCAGTTGTTGAGAAACATGAGAAACCACAGATTCCAAGTGGCCTTCCTTCTTCAGTTGAGAATCTCCTTATCGGGTGCTTTGAGTATGATCCGAGGAATCGACCTTTAATGGTGGATATTCTTAGTGTCTTCAAAAGCTCACTGAATGAAGTGGCCAATGATGGAGGATGGAGATATCTTGATAATGTGAAAGTTACTCCAAAATCGAATAGCACTGGCTACACACAGTGGTTTCTCTCAAAGGATAATCTTCAAGTGGGTGATATGGTTCGATCTAGAAAGCCTCTCAGTTCATGTAAACCTCAAAACATGGATATCCCAGAAGGAACTGTTGTTGGTAACACAGATAACGGGTTCGTCCTTGTGAGGGTCCCTGGTATTCACGACCCTTTAAGAGTTCACGTGTCATCTCTCAAACGCATCACATCTGGCATGGCAGTTGGTGATTGGGTACGTTTGAAGGATGAAAACGGGAAGCACTCGTCAGTGGGCATTCTACATTCCATCAATCGGGACGGAAGTGTGGCTGTTGGATTTATTGGGCTGCAAACTCTATGGAATGGAAATTCTTCACAACTCGAAATGGCAGAATCTTACTGTGTGGGCCAGTTTGTTAGGCTGAAAGAAATCGTTGTAAGTCCTCGATTTGAATGGCGGCGTAAAAGAGCAGGGGCCTGGGCCACTGGTAGGATTTCATGGATCCTACCAAATGGGTGTTTGGTTGTTAAGTTCCCCGGGTTGTTGCCTTTCGGGAATGAATCGATTACTTTCTTGGCCGATCCCTCTGAGGTTGAAGTGGTTGATTTCAAGACATGTCCTGGGTTGATAGAAAAGTATCAACATGTAGAGCATCATCACTGGGCTGTTAGACCCGTTCTCATCGCATTTGGCCTATTTACCGCTATGAAACTCGGCATATTAATCGGCAAGAAAGCCGGGAGGAGGAACATGAACAAGGTTAACGCGATCGAAAGTGAAAGTGAGGGCCAAAATGCTATCAAGTCAAAACCTGGTGTGGTAAATCCTGGCAACAACACAACATGGGTTCCTTCTGTTGCTAATATCATTTTCAAAGAAGGTAGTAGGTAG 1899 0.4308 MAREVIASASPTSPSAASFEYEILDGNAEILKTVRSSSSHASSWIESERLKLRHRIGRGPFGDVWLATLHQSTEDYDEYHEVAVKMLYPIKEDHMKIVLDKFNELYFKCQGVSSVCWLHGISVLNGRICIIMNLYEGSIGDKMARLREGRISLHDVLRYGINLAEGILELHSTGLLILNLKPSNVLLDNNDQAILGDVGIPNILLGTSFLSSDMAQRLGTPNYMAPEQQDPEVRGPISFETDSWGFGCTIVEMLTGIQPWYGCPVGRIYQSVVEKHEKPQIPSGLPSSVENLLIGCFEYDPRNRPLMVDILSVFKSSLNEVANDGGWRYLDNVKVTPKSNSTGYTQWFLSKDNLQVGDMVRSRKPLSSCKPQNMDIPEGTVVGNTDNGFVLVRVPGIHDPLRVHVSSLKRITSGMAVGDWVRLKDENGKHSSVGILHSINRDGSVAVGFIGLQTLWNGNSSQLEMAESYCVGQFVRLKEIVVSPRFEWRRKRAGAWATGRISWILPNGCLVVKFPGLLPFGNESITFLADPSEVEVVDFKTCPGLIEKYQHVEHHHWAVRPVLIAFGLFTAMKLGILIGKKAGRRNMNKVNAIESESEGQNAIKSKPGVVNPGNNTTWVPSVANIIFKEGSR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1046 632 Gene3D Phosphorylase Kinase; domain 1 15 135 - -
Lal25g1046 632 ProSiteProfiles Protein kinase domain profile. 50 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1046 632 PANTHER OS06G0639500 PROTEIN 10 631 - -
Lal25g1046 632 PANTHER OS06G0639500 PROTEIN 10 631 - -
Lal25g1046 632 CDD STKc_PknB_like 51 305 - -
Lal25g1046 632 Gene3D Transferase(Phosphotransferase) domain 1 136 346 - -
Lal25g1046 632 SUPERFAMILY Protein kinase-like (PK-like) 48 314 IPR011009 -
Lal25g1046 632 Pfam Protein tyrosine and serine/threonine kinase 50 312 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1046 Lal-Chr25 13838407 13844557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1046 45 321 MAP Kinase Kinase Kinase AT2G17700 25.532 1.63e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lal25g1046 PK_Tyr_Ser-Thr 1.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1046 - - gsj:114393396 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1046 25 13838407 13844557 Lal25g1046 25 13838407 13844557 ECH
Lal17g0226 17 1408245 1411624 Lal25g1046 25 13838407 13844557 ECH
Lal25g1046 25 13838407 13844557 Lal17g0226 17 1408245 1411624 PCT
Lal17g0226 17 1408245 1411624 Lal25g1046 25 13838407 13844557 PCT