Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1031 ATGCTTGAAGATCAGAGAAGGAAATACAAGAATCTTCAATCATATCTTCTAGAGATCAAAAATAGTAAAAGTAGTTATGTACATAACAAACTTCATACAAACAAGAGAACAAGACTTGAAGACTTTCCAACCGCAAAAAAGCCATTACAAGTCTTTGTCAGAACACACCCCAACGACATTACTTTGATAATAAAAGATGGATATGAGTGGAGGAAGTATGGACAAAAGGTTACCAAAGACAATGCTTCTCCTCGAGCTTACTTCAGGTGCTCCATGGCTCCTAACTGTTCAGCCAAAAAGAAGGTGCAAAGATGTGTAAATGATAGTTCTATAATTGTTGCAACTTATGATGGAGAGCATAACCATGACTCATTCTTACCATCTTCCTCCACACCCAAAGGCTCAATGGGTAATAATAATTTACCTCTTACAATCATTGAAAATTACAAAGAAGCCCTTAACATTGACCATGCTCTTTCAACAAATAAAAGAGTTTGTAAGGATATTATGGAACAAAATTACAATGACAACAACAACAACCTCAAAATTGGAGAATATGTAAGTTCATTAATGAAAGATCCTGAGTTCACTATAGCAATAGCTGAAGCAGTTGCTCAGTCCATCATTGCTCAACCTAAGCAACAATTTCTATTAGAAAAAGAGTAA 666 0.3514 MLEDQRRKYKNLQSYLLEIKNSKSSYVHNKLHTNKRTRLEDFPTAKKPLQVFVRTHPNDITLIIKDGYEWRKYGQKVTKDNASPRAYFRCSMAPNCSAKKKVQRCVNDSSIIVATYDGEHNHDSFLPSSSTPKGSMGNNNLPLTIIENYKEALNIDHALSTNKRVCKDIMEQNYNDNNNNLKIGEYVSSLMKDPEFTIAIAEAVAQSIIAQPKQQFLLEKE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1031 221 PANTHER WRKY TRANSCRIPTION FACTOR 49 1 208 - -
Lal25g1031 221 SMART WRKY_cls 64 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal25g1031 221 Pfam WRKY DNA -binding domain 65 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal25g1031 221 ProSiteProfiles WRKY domain profile. 63 125 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal25g1031 221 Gene3D WRKY domain 50 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal25g1031 221 SUPERFAMILY WRKY DNA-binding domain 63 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal25g1031 221 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 208 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1031 Lal-Chr25 13600896 13604566 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1031 22 211 WRKY Transcription Factor Family AT1G80840 38.647 3.94e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal25g1031 WRKY 9.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1031 - - gmx:100170679 254.218