Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1027 ATGGCTGGTTTATTAGTACTCTTATTTCTCCTATTTGGCTTATCTGCAGCATCTAAGGATATATTGGTTGGAGGGAAATCAGATGCATGGAAGATTCCTCCTTCTTCTTCAGATTTCCTCAATCAATGGGCTGAAAGGTCTAGATTCCAAGTTGGTGACCATCTTGTTTGGAAATATGAAGGTGGTAAGGATTCAGTATTGAGAGTAGGGAGAGAAGATTATGCAAAATGCAGCACATCAAATCCAATTAAGGAGTACAATGATGGGAACACTAAAGTGAAGCTTGACCATCCTGGCCCATTCTACTTCATAAGTGGAGCAAAGGGTCATTGTGAGAAGGGTCAAAAACTCATTGTGGTGGTTATGACTCAAAGAGACAGGAACACTAGTATTTCCAATGCACCTTCACAAGCTCCAAGTCAGAACTTTGAAGGTGGTCCAGCACCTAGTCCTACTAGCACTGCCACTTCTTTACAAAGTTGTGGCTTTCTTCTTACTCTAGCTGTATTTGTGGCTATGTGGGTTTTTTGA 531 0.4124 MAGLLVLLFLLFGLSAASKDILVGGKSDAWKIPPSSSDFLNQWAERSRFQVGDHLVWKYEGGKDSVLRVGREDYAKCSTSNPIKEYNDGNTKVKLDHPGPFYFISGAKGHCEKGQKLIVVVMTQRDRNTSISNAPSQAPSQNFEGGPAPSPTSTATSLQSCGFLLTLAVFVAMWVF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1027 176 Gene3D - 19 134 IPR008972 -
Lal25g1027 176 PANTHER EARLY NODULIN-LIKE PROTEIN 3 5 171 - -
Lal25g1027 176 MobiDBLite consensus disorder prediction 129 153 - -
Lal25g1027 176 PANTHER BLUE COPPER PROTEIN 5 171 IPR039391 GO:0009055
Lal25g1027 176 ProSiteProfiles Phytocyanin domain profile. 19 123 IPR003245 GO:0009055
Lal25g1027 176 SUPERFAMILY Cupredoxins 19 122 IPR008972 -
Lal25g1027 176 CDD OsENODL1_like 19 122 IPR041846 -
Lal25g1027 176 Pfam Plastocyanin-like domain 30 115 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1027 Lal-Chr25 13562902 13564238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1027 4 176 Phytocyanin Superfamily AT4G31840 52.542 7.50e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1027 - - gmx:100527857 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g1027 25 13562902 13564238 Lal25g1027 25 13562902 13564238 ECH
Lal25g1027 25 13562902 13564238 Lal10g0687 10 14649518 14655231 LSH
Lal25g1027 25 13562902 13564238 Lal17g0200 17 1202492 1206245 PCT
Lal17g0200 17 1202492 1206245 Lal25g1027 25 13562902 13564238 PCT