Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1024 ATGATTAAGAATACTAATGATCATGACAATAATTCTAAGAAAGAAAGAGTTGTTTGGTCAGAGGAATTACACCGCAAGTTTGTTGTTGCTGTTAATCACTTAGGAGGAATTGACAAGGCTGGACCTAAAAAAATTCTAGCATTGATGAAAGGTGAAAAGCTGACAAAGGAGAATGTGGCCAGCCATCTGCAGAAGTATAGACTTCATCTTAAAAGAGTTAGCAGCACTTTTGAGCCTAACCAAGAGGGTTCTATGCAGTTTCATGACATTAATGATGCTGCTGTTCAGAATGGTTTTCACAGTGTTGTTAGTCAAGCAATACCAACATCAGAAAGGTTTTCCAATCAAGGACCTGACTCATTGTTCAACGATACTTCATTTCAATGGTTGGATGACAATGGAAAATGTGACTTCAATTTTTGTGAATGGGATCTTGGAAATGGTTTCATGGAACTAAGCGAAGAAAACTCTTCATTGATGGAACAACATCAGGGGTACTTCGGGAACCAACAACACCAGTCTCAAGGCATCTGCGATTTAGTACAAAACTCGGTCACTGCATCTTCTAGCTGCAGCTCTCATGACTTACATGGGATTGCTGAGCTGAGGCACGAGATGGCAGCAATCAGACACGAGAATCGTCAATTGAGGGAGATTGTCCATGCTATGAAGGCACAACAGGACATGTTGGTGCAGGCTGTCTTACAGAGAACAATCGTCCAACCCAATATGCTAATGAGGCAATAG 747 0.411 MIKNTNDHDNNSKKERVVWSEELHRKFVVAVNHLGGIDKAGPKKILALMKGEKLTKENVASHLQKYRLHLKRVSSTFEPNQEGSMQFHDINDAAVQNGFHSVVSQAIPTSERFSNQGPDSLFNDTSFQWLDDNGKCDFNFCEWDLGNGFMELSEENSSLMEQHQGYFGNQQHQSQGICDLVQNSVTASSSCSSHDLHGIAELRHEMAAIRHENRQLREIVHAMKAQQDMLVQAVLQRTIVQPNMLMRQ 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1024 248 Pfam Myb-like DNA-binding domain 16 67 IPR001005 -
Lal25g1024 248 Gene3D - 11 74 - -
Lal25g1024 248 SUPERFAMILY Homeodomain-like 12 72 IPR009057 -
Lal25g1024 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 71 IPR017930 -
Lal25g1024 248 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR24 4 98 - -
Lal25g1024 248 Coils Coil 199 219 - -
Lal25g1024 248 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 98 IPR045279 GO:0009736
Lal25g1024 248 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 14 69 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1024 Lal-Chr25 13551704 13553723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1024 13 74 Response Regulator Gene Family AT2G25180 72.581 7.88e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal25g1024 Myb_DNA-binding 1.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1024 - K14491 lang:109350585 300.827