Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1017 ATGGATGTGAAAGTTTTTGTTGTTCTTATTTTGTTCCTCAACCTTTGTTCATTTCCAATAATATTTGTGGAATCATTATCCTTCAATATAACTGATTTCAATAATGGTGTAAGTGCAAGTAATATGGCATATGAAGGTGATGGCCAACCCATCAATGGATCCATAGAACTCAACAAAGTCAGCTATTTATTTCGTGTTGGAAGAGCCATTTATGGACAACCTTTGCATCTTTGGGACTCATCCACAAAGGTTGTAACAGATTTCACAACTAGTTTCACTTTCATTATTGATAAGGTTAATGATACTTCATATGGTGATGGATTTGCATTTTACATGGCTCCACTTGGTTACCAAATTCCACCAAATTCAGCTGGTGGCACTTTTGCACTATTCAATGCTACTACTAATAGCAACTTGCCTCAAAATCATGTTCTTGCTGTTGAATTTGATACTTTTATAGGCTCAACTGATCCACCTATGAAGCATGTTGGCATTGATGATAACTCCCTCACTTCAGTTGCTTATGGCAGGTTTGATATTGATATTAACACTGGGAATCCATGTCATGCTATCATAACTTATACTTCTTCTACCAAGAACTTAATTGTCTCATGGTTTTTCAATGGAAAGAGTAGTAGTAACTCTAGTTCTCTGTCTTATAACATTGATCTCATGAAAATTCTACCTGAGTTTGTTAATATTGGGTTCTCAGCTTCAACTGGTTTGTCCACTGAAAGAAATGTTATTCAATCATGGCAATTTAGTTCAACTTTAAACTCTTCTGTGGATGATATAGGGTTAAACAGAGAAAGCAAGAAATCAAAGTCAAACAAGGTTGTTGTAGTAGTTGCTATAACATGTCCTATTGTTTTGGTGCTTGTTGGAATTTTTGTTGGTTGGTTAGTGTTAAAGAAGAGGAGAGCCAATGTTGATGATAATGATGAAAACCTTGGAAATGCTTCAGTGGAATTTGATCTTGACAAAGCAACCATTCCTAGAAGATTTGATTACAAGGAATTACTTGCTGCTACCAATGGTTTCGCAGACGATAAGAGTCTTGGGAGAGGGGCATCCGGACTAGTTTACAAAGGGGTTTTGAGTTATTTGGGGAGAGTTGTTGCTGTCAAGAGGATTTTCGCAGATTTTGAAAATTCGGAGAGGATCTTCATCAACGAAGTAAAAATCATAAGCCGATTGATCCATCGAAACTTGGTTCAATTCATAGGGTGGTGCCATGAGGAAGGTGAATTGCTTTTGGTGTTTGAGTACATGCCTAATGGAAGCCTCGATGCACATCTCTTCGGTAACAAGAAAACATTACCATGGGATGTGAGGTACAAGGTGGCATTAGGCGTGGCACACGCGATTCGCTATCTCCACGAAGATGCAGAGCAGTGTGTCCTTCATAGAGATATTAAGTCAGCTAATGTTTTATTGGACACAGATTTCAGCACTAAGCTGGCCGATTTCGGGATGGCAAAGTTGGTTGATCCAAGATTAAGGACTCAAAGGACAGGAGTGGTGGGGACATACGGGTACTTGGCGCCGGAATATATCAATGGAGGGAGGGCTAGTAAGGAATCAGATATCTATAGTTTTGGTGTTGTGGCATTAGAAATTGCATGTGGAAGGAGGACTTACCAAGATGGAGAATTTCATGTGCCAATTATAAATTGGATATGGCAACTTTATGTGGAAGGGAATGTGCTGAATGCTGTTGATGAGAGATTGAATAAGGACTTCAATGAAGATGAAATGTTAAGTTTATTAACATTAGGACTATGGTGTACACATCCAAATGATAAGGAGAGGCCAAAAGCAGCACAAGTAATTAAGGTTCTTCAGTTAGAAGCTACATTACCAGTAATTCCATCTAACATTCATGAACATTCTTCTCATCCAACCCATACCCATTATTCCTCTCATTCACAACCCATGACTACAAGTCTTGTTCATGTTGGACGTTAA 1968 0.3841 MDVKVFVVLILFLNLCSFPIIFVESLSFNITDFNNGVSASNMAYEGDGQPINGSIELNKVSYLFRVGRAIYGQPLHLWDSSTKVVTDFTTSFTFIIDKVNDTSYGDGFAFYMAPLGYQIPPNSAGGTFALFNATTNSNLPQNHVLAVEFDTFIGSTDPPMKHVGIDDNSLTSVAYGRFDIDINTGNPCHAIITYTSSTKNLIVSWFFNGKSSSNSSSLSYNIDLMKILPEFVNIGFSASTGLSTERNVIQSWQFSSTLNSSVDDIGLNRESKKSKSNKVVVVVAITCPIVLVLVGIFVGWLVLKKRRANVDDNDENLGNASVEFDLDKATIPRRFDYKELLAATNGFADDKSLGRGASGLVYKGVLSYLGRVVAVKRIFADFENSERIFINEVKIISRLIHRNLVQFIGWCHEEGELLLVFEYMPNGSLDAHLFGNKKTLPWDVRYKVALGVAHAIRYLHEDAEQCVLHRDIKSANVLLDTDFSTKLADFGMAKLVDPRLRTQRTGVVGTYGYLAPEYINGGRASKESDIYSFGVVALEIACGRRTYQDGEFHVPIINWIWQLYVEGNVLNAVDERLNKDFNEDEMLSLLTLGLWCTHPNDKERPKAAQVIKVLQLEATLPVIPSNIHEHSSHPTHTHYSSHSQPMTTSLVHVGR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1017 655 PANTHER PUTATIVE-RELATED 7 630 - -
Lal25g1017 655 MobiDBLite consensus disorder prediction 629 655 - -
Lal25g1017 655 ProSitePatterns Protein kinases ATP-binding region signature. 353 376 IPR017441 GO:0005524
Lal25g1017 655 Gene3D Phosphorylase Kinase; domain 1 332 423 - -
Lal25g1017 655 Gene3D - 23 269 - -
Lal25g1017 655 SMART serkin_6 347 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1017 655 PANTHER - 7 630 - -
Lal25g1017 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Lal25g1017 655 Pfam Legume lectin domain 25 259 IPR001220 GO:0030246
Lal25g1017 655 CDD lectin_legume_LecRK_Arcelin_ConA 26 258 IPR001220 GO:0030246
Lal25g1017 655 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Lal25g1017 655 ProSiteProfiles Protein kinase domain profile. 347 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1017 655 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 262 IPR013320 -
Lal25g1017 655 Gene3D Transferase(Phosphotransferase) domain 1 424 621 - -
Lal25g1017 655 Pfam Protein kinase domain 348 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1017 655 ProSitePatterns Legume lectins alpha-chain signature. 228 237 IPR000985 -
Lal25g1017 655 CDD STKc_IRAK 353 615 - -
Lal25g1017 655 MobiDBLite consensus disorder prediction 637 655 - -
Lal25g1017 655 SUPERFAMILY Protein kinase-like (PK-like) 331 637 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1017 Lal-Chr25 13499468 13501435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1017 9 633 Receptor kinase-like Gene Family AT5G10530 45.141 1.46e-180 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal25g1017 Pkinase 7.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1017 - - gmx:100791220 887.486