Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1012 ATGGGAAGTTTTGTGGACTCTTCTTTCTTCTTACTTTTCTGTGCATTTTCTCAATCTCTATTAATATTTTTGATGATGAGTGGGTTGAATAAAAATTGTAAAGTGTTGTTATGTTTATGGATCCTAATATTCTTAGTACTACTACCCAGTGTAGCTGTTGGAGAGTGCACATGTGATGAAGAGGAAGAAAGCAAAAACAAAGGAGAAGCATTAAAATACAAAATAGCAGCATTAGTATCAATACTAATATCAAGTGTAATTGGTGTTTGTATACCATTCCTTGGAAAAGTGATACCTGCCCTAAGTCCTGAAAAGAATATATTTTTTATGATTAAGGCTTTTGCTGCTGGTGTAATATTGGCCACTGGTTTCATTCATATTCTCCCTGATGCATTTAATGACCTTACTTCACCTTGTCTTAAGAGTAATCCATGGGCTGATTTTCCTTTCACTGGCTTTGTTGCTATGTGCACTTCCATGTTTACACTTATGCTTGATGCTTATGCCACTAGTTATTTTCAGAATTCACAAAACAATAAAACAGGCCATGAAGTTATAAATAGAGATGTTGAGAATTCTAATGGTCATGTTGATCCTCACACACATGGAGCACATGCTCATGCACATACACATGCTGCTGTTTCTTATGAATCCACAGATATTCTTCGTCACCGAGTCATATCTCAGGTATTGGAGCTAGGGATTGTTGTTCATTCAGTGATAATAGGAATTTCATTGGGAGCATCAGATAATCCTGATACAATAAAGCCCCTTGTTGCAGCTTTGTCTTTTCATCAATTCTTTGAGGGCATGGGACTTGGTAGCTGTATTACTCAGGCGAAACTGAAGCTGAGAACAATAACAACAATGGCATTGTTTTTCGCTTTAACAACACCAGTAGGGATTGCAATTGGTATAGGGATAGGTACAAGTTATAATGAAAACAGTCCAACATCACTTATAGTTGGAGGAGTATTCAATGCAGCATCAGCTGGAATATTAATATATATGGCACTTGTTGATATTCTTGCTGCTGATTTTTTGAATCCAAGAATGTTACAAAATGGAAGGCTTCAATTTGGAGCTAATCTATCTCTTCTAATTGGAGCTGGTTGTATGTCTCTTCTTGCCAAATGGGCTTGA 1143 0.3657 MGSFVDSSFFLLFCAFSQSLLIFLMMSGLNKNCKVLLCLWILIFLVLLPSVAVGECTCDEEEESKNKGEALKYKIAALVSILISSVIGVCIPFLGKVIPALSPEKNIFFMIKAFAAGVILATGFIHILPDAFNDLTSPCLKSNPWADFPFTGFVAMCTSMFTLMLDAYATSYFQNSQNNKTGHEVINRDVENSNGHVDPHTHGAHAHAHTHAAVSYESTDILRHRVISQVLELGIVVHSVIIGISLGASDNPDTIKPLVAALSFHQFFEGMGLGSCITQAKLKLRTITTMALFFALTTPVGIAIGIGIGTSYNENSPTSLIVGGVFNAASAGILIYMALVDILAADFLNPRMLQNGRLQFGANLSLLIGAGCMSLLAKWA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1012 380 PANTHER ZINC/IRON TRANSPORTER 46 380 - -
Lal25g1012 380 PANTHER ZINC TRANSPORTER 1 46 380 - -
Lal25g1012 380 TIGRFAM zip: ZIP zinc/iron transport family 56 380 IPR004698 GO:0005385|GO:0016021|GO:0071577
Lal25g1012 380 Pfam ZIP Zinc transporter 72 377 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1012 Lal-Chr25 13393944 13397633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1012 36 380 Inorganic Solute Cotransporters AT3G12750 51.852 1.16e-122 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1012 K14709 - gmx:100789557 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0722 8 5141412 5147883 Lal25g1012 25 13393944 13397633 LSH
Lal25g1012 25 13393944 13397633 Lal17g0149 17 914375 921924 PCT
Lal25g1012 25 13393944 13397633 Lal4g0165 4 1034090 1036947 PCT
Lal17g0149 17 914375 921924 Lal25g1012 25 13393944 13397633 PCT
Lal4g0165 4 1034090 1036947 Lal25g1012 25 13393944 13397633 PCT