Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g1003 ATGATGATGAAGATATTGAAGATGAATAGTGCAGAGAAGAAGATAGGTGCAGGTCGTATAGTGGCAGTGGCAATTGAGAATAACAAGACAAGTCAATATGCTGCCAAATGGGCTGTGGAAAATCTTCTTCCTAAAGATCAATCTCTCTTTCTAATTCATGTTAGAACAAAACCACCTGACTCCAAGTCATGGGGAAACCAAGATTTCAACCAAGATGGTCCTAAACCCGACAAGGAATCAAAGGATCTTTTCGATTCATTTCGTGTCTTCTTCAATAGAAAGAGCGTACAATGCAAAGAATTGTTGTTAGAGGACACAGATATATGTAAGGCATTGATAGAAAGCATGCACACATATTCCATTGAGGTTATGGTACTTGGGGCACCATCAAGAAGTGGCATTGTTAGGAGATTTAGGACAACAGATGTGCCAAGCAATGTGACAAAAGGGGCACCTCCATTCAGTACTATTTATATCATTTCCAAAGGAAAAGTTTCATCTGTCAAAACTTCTACTGCTCCACTTGTATCTGCTAAAACTACATCTGCACCTGCACTTGCACCTACAACAATCCATAATGGTTACCAACTTCACCCGCAACTCGCATCGCAAAGTGTTGCCGATAGAATAATCGATTCACAATCAATGCGCAATTACACACCACGATCTGGAGCAATGGCATCAACAGAGAAGGTATCGTATGGGTCACGCCATGTCCCAGATGAGGATGATTTCATATCACCATTCACAAGAGCTGGTAGATCATATGAGTCATCATTAGCTCCAGATTCAGATATATCATTTGTGAGTAATGGAAGGCCAAGTGTTGATCGAATGTTCCCTTCATTATATGATGATAATGATGGTGGAAGGCTTTCATATACCGCAGATTTTGATCTCAGAAATTTTGGTTCAACCATGTCAGGAGGAGGACTTAAATCAATTGACATGGCCTCTCTTACGCCTATGCGCGACTTCCCATTCACCTCACAAAGCAATGGTAGCATGTCATCGTTGAGATTATCCGACCCCTCGGATGATGTGGAAGCAGAGATGAGGAGACTGAAGCTAGAACTGAAGCAGACAATGGAAATGTATAGTACAGCTTGCAAGGAAGCCTTAACAGCAAATCAGAAGGCAATGGAACTTCAACGTTGGAAAATGGAAGAACAAAAGAAAATGGAAGAGGCTCGAATAGCTGAAGAAACAGCGTTGGGACTTGTAGAGATGGAGAAAGAAAAATGTAGAGCTGCATTGAAGGCCGCAGAACAATCTCAGAGGATTGTAGAGTTGGAATCACAAAAAAGAATGAATGCAGAGGCGAAAGCTGAAACAGAACGGAAGAAGGGAGGAGATTCTTTTGCACCTGGTAGTGCGAGGTACAGGAGGTATACTATAGAGGAAATCGAAGAGGCAACCAAATGCTTTTCTGACACTCTCAAGATCGGCGAAGGAGGTTATGGTCCTGTATACAGGACTGAACTCGATCACACGCCCGTTGCAATTAAAGTTCTGAAGCCAGATGCGGTTCAAGGACGTGCTCAATTTCAGCAGGAGGTTGAAGTGTTAAGTTGCATAAGGCACCCAAACATGGTTCTCCTACTTGGAGCATGTCCAGAGTATGGATGCCTAGTTTATGAGTACATGGCTAATGGAAGCTTAGATGATTGCCTCTTCCGGAGGGGTAAGTCACCACCACTTCCTTGGCAGTTAAGATTCCAGATTGCTGCAGAGATAGCCACCGGTCTCCTTTTCCTTCACCAAACAAAGCCAGAGCCGTTGGTGCACCGTGACTTAAAACCTGGCAACATTTTGCTTGACCGCAACTATGTGAGCAAGATAAGTGATGTAGGATTGGCCAGACTTGTCCCACCTTCAGTGGCAGACACTGTGACTCAGTATCGAATGACATCTACTGCTGGAACCTTTTGTTACATCGACCCTGAGTACCAACAAACCGGTATGCTAGGTATTAAGTCTGATATTTACTCACTAGGGATCATGCTTCTACAATTGGTAACAGCCAAGCCACCAATGGGGTTGACTCATCATGTTGCAAGATCCATTGAGAATGGGACTTTTGCTGAGATGCTTGACCCAGCTATCGATGATTGGCCACTTGAACAAGCATTGCATTTCGCCAAACTTTCCTTGCAATGTGCTGAAATGAGGAGAAAAGATAGACCTGATCTTGGAAAAGTAGTATTACCTGAGATCAATAAACTTAGAGCATTTGCTGAACAAAACATGCCTGTCTTCATGTATGGAGGTACTACAGGATTCGCTACCAGAACTAGCAATGCTTCCATGTATTCTTCTTCCACACATCAAGCAATAGATACTGACAATGATGGATCTTGTGATTACAAAAAATTCAAGGATTGGTTTGGTATCACTCTTATCCACCAACCTGTGCAGATCTCTGCGACTGGGGCAAGGGAGAAGCTATCTCCCCAAGTTTCTCAATTCCTAGAATGA 2478 0.4302 MMMKILKMNSAEKKIGAGRIVAVAIENNKTSQYAAKWAVENLLPKDQSLFLIHVRTKPPDSKSWGNQDFNQDGPKPDKESKDLFDSFRVFFNRKSVQCKELLLEDTDICKALIESMHTYSIEVMVLGAPSRSGIVRRFRTTDVPSNVTKGAPPFSTIYIISKGKVSSVKTSTAPLVSAKTTSAPALAPTTIHNGYQLHPQLASQSVADRIIDSQSMRNYTPRSGAMASTEKVSYGSRHVPDEDDFISPFTRAGRSYESSLAPDSDISFVSNGRPSVDRMFPSLYDDNDGGRLSYTADFDLRNFGSTMSGGGLKSIDMASLTPMRDFPFTSQSNGSMSSLRLSDPSDDVEAEMRRLKLELKQTMEMYSTACKEALTANQKAMELQRWKMEEQKKMEEARIAEETALGLVEMEKEKCRAALKAAEQSQRIVELESQKRMNAEAKAETERKKGGDSFAPGSARYRRYTIEEIEEATKCFSDTLKIGEGGYGPVYRTELDHTPVAIKVLKPDAVQGRAQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGKSPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVARSIENGTFAEMLDPAIDDWPLEQALHFAKLSLQCAEMRRKDRPDLGKVVLPEINKLRAFAEQNMPVFMYGGTTGFATRTSNASMYSSSTHQAIDTDNDGSCDYKKFKDWFGITLIHQPVQISATGAREKLSPQVSQFLE 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g1003 825 Pfam Protein kinase domain 479 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1003 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Lal25g1003 825 Coils Coil 345 365 - -
Lal25g1003 825 ProSiteProfiles Protein kinase domain profile. 476 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1003 825 MobiDBLite consensus disorder prediction 59 78 - -
Lal25g1003 825 PANTHER OS02G0152300 PROTEIN 9 777 - -
Lal25g1003 825 Gene3D HUPs 18 153 IPR014729 -
Lal25g1003 825 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 138 - -
Lal25g1003 825 Gene3D Transferase(Phosphotransferase) domain 1 549 751 - -
Lal25g1003 825 CDD STK_N 20 163 - -
Lal25g1003 825 SMART serkin_6 476 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g1003 825 Gene3D Phosphorylase Kinase; domain 1 457 548 - -
Lal25g1003 825 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 9 777 - -
Lal25g1003 825 SUPERFAMILY Protein kinase-like (PK-like) 457 735 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g1003 Lal-Chr25 13332098 13337767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g1003 3 770 Receptor kinase-like Gene Family AT1G78940 51.970 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal25g1003 Pkinase 3.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g1003 - - cam:101511100 1007.67