Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0939 TATAAGCGCCCCGGGAGTGGATATCTTGGCGTCATTTCACAAGTCGTTTCTCCATCAGATGATGGATATGATAAAAGGTCTGTGAAATATAACATAATATCAGGAACATCTATGTCATGCCCTCATGTTGCTGGAATAGCTGCATATTTGAAAACATTTCATTTTGATTGGTCACCGTCAGCCATCAAATCTGCTATTATGACTTCAGCAAATCCTATGAAGGATTCTAAGGATGAAGTTGGTGAATATGCTTATGGATCTGGCCATGTCAATCCGATTTCAGCTGTTCATCCTGGACTTATCTATGACATCTCCTTAGATGATTATATACAAATGCTTTGCAACTTGGGTTATGATAGCACAAAAGTTAAATTATCTCTGGTAAGAACCAATTCTTGCTCCAACACTATTGATAGATCCCTGGTGAGAGATCTCAATTATCCTGCTCTTGCTATTGATGTTAAAACAGTCACAAATGTCGGCATAGGAAAATCAATTTATAAGGCGTCAATTTTACCAAATCCTAAAATCAAAATTACGGTGGTACCCGAGACTCTGTCATTCAAATCACTTTATGAGAAACAATCTTTTGTCCTTACTGTCACCGGTAATGAATTACCTACACAAACTGTAATTTCATCATTGTTATGGTCAAATGGCATCAAAAATGTGAGGAGTCCAATTATTGTAAATGTTTCCGATTAG 705 0.3688 YKRPGSGYLGVISQVVSPSDDGYDKRSVKYNIISGTSMSCPHVAGIAAYLKTFHFDWSPSAIKSAIMTSANPMKDSKDEVGEYAYGSGHVNPISAVHPGLIYDISLDDYIQMLCNLGYDSTKVKLSLVRTNSCSNTIDRSLVRDLNYPALAIDVKTVTNVGIGKSIYKASILPNPKIKITVVPETLSFKSLYEKQSFVLTVTGNELPTQTVISSLLWSNGIKNVRSPIIVNVSD 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0939 234 Pfam Fibronectin type-III domain 144 230 IPR041469 -
Lal25g0939 234 ProSitePatterns Serine proteases, subtilase family, serine active site. 35 45 IPR023828 -
Lal25g0939 234 Gene3D - 113 233 - -
Lal25g0939 234 SUPERFAMILY Subtilisin-like 17 97 IPR036852 GO:0004252|GO:0006508
Lal25g0939 234 Pfam Subtilase family 18 88 IPR000209 GO:0006508|GO:0008236
Lal25g0939 234 Gene3D Peptidase S8/S53 domain 3 112 IPR036852 GO:0004252|GO:0006508
Lal25g0939 234 ProSiteProfiles Serine proteases, subtilase domain profile. 1 96 - -
Lal25g0939 234 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 232 IPR045051 -
Lal25g0939 234 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 4 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0939 Lal-Chr25 10434631 10435367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0939 4 230 Subtilisin-like Serine Gene Family AT3G46850 48.760 4.82e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0939 - - lang:109338864 326.25