Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0922 ATGGCAACTGATATGCAGAGGCTTGTTGGAACAAGTGAGGATGATGAAGAGGAAATGGAAATGGATGTAAAAGAAGTGGATGATGATGATTATGAGGAAGAAGAAAATAGAGGTGAGCATGGAATTGTATTGGGGATGGTTGAGATGGATGGTAGGAATGGGATAGTAAGTGTTGATGGCGACAACAGATTTCAACAGCACCAGCTTTTTGAAGATCAAGTGGGCACCCCAGGTGGAGGTACTCGAAGATGTAGGCCACTAGAAGAAAAAGAGAGAACGAAGCTTAGAGAGAGGCGTCGGAGGGCAATCACTGCAAGGATCTTGGCTGGGCTCCGCAGGCATGGCAACTACAATCTTAGAGTTAGAGCTGATATAAATGATGTTATTGCTGCTCTAGCAAGGGAAGCTGGCTGGGTAGTTCTTCCAGATGGCACTACTTTCCCTTCAAGCTCTCAGGGTCAAAGGCCGACTGCTGGTAATTCTACAACTATTACTTCATCATCTTCTCATGGGCCTTCACAACAAACTCCATCTACTTCCCTCGGGGGAGTTGCTTCTGGTTATAGGAGCTCAACAAAGTATAATACATGTCAAATGAAAGGTGTTTTTATACCTGCTCGATCTCTTGATAATCCATCCATGGCGGGGGATGGAGAAGAGCAAAGAGAGAATCGTCCTCTAATTGGTTGTTCAATGCATAATGTTGATGCAAAGCAGATTGTTAACATACCACCCAGATTAACAGAGCGTGATTTGGCTGGTACCCCTTATATTCCAGTTTACATGATGCTACCATTGGGGGTTATCAACTTGAAGTGCGAGCTTGTAGATCCAGATGGCCTACTAAAGCAGTTGAATGTGTTAAAATCAATAGATGTTGATGGTATTATGGTAGACTGTTGGTGGGGAATAGTGGAGGCGCATGCTCCACAAGAGTATTATTGGAATGGTTACAAGAGACTCTTCGAAATTGTGCATGAGCTTAAGTTTAAGCTGCAGGTTGTGATGTCTTTCCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCACTACCCCATTGGGTTGTTGAAATTGGAAGGACCAATCCTGACATTTTTTTCACAGATAGATCGGGAAGACATAACCCTGAATGTCTATCTTGGGGGATAGATAAGGAGCGGGTGTTAAGAGGTCGAACTGCTTTGGAGGTTTATTTTGATTTCATGAGAAGTTTCCGGGTAGAGTTTGATGAGTATTTTGAGGAGGGTTTCATCTCCATGATTGAAGTTGGACTAGGTCCATGTGGAGAGCTACGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATACCCTGGTATTGGTGAATTCCAGTGCTATGATCAGTATTTGTCAAAGAGTCTCAGGAAAGCAGCGGAAGCAAGGGGGCACTCTTTTTGGGCTAGAGGACCAGATAATGTGGGTACCTATAATTCTCAGCCACACGAAACTGGTTTCTTTTGTGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTTCTTAGCTGGTACTCTCAAGTTTTAGTTGATCATGGAAACCGTGTACTTTCTTTGGCAAAATTAGCTTTCCAGGGATCTCGAGTTGCTGCAAAGCTATCAGGTATCTACTGGTGGTACAAAACTGCCAGTCATGCTGCTGAATTAACTGCTGGGTATTATAACCCATGCAATCGTGATGGTTATACTGCTATTATGGCAATGTTGAAGAGAAACGAAGTTAGCTTAACCATTGCTTGTACTGACTTGCACACATTGAACCAGCATAAGGTCTTTCCAGAGACATATGCAGATCCAGAGGGACTAGTTTGGCAAGTGTTGAATGCTGGGTGGGATGTTGGCCTACCGGTTGCTGGTGAGAATGCACTTCCTTGCTTAGATAGAGTTAGCTATAACAAGGTTTTGGATAATGCCAAACCCATGAGGGATCCAGATGAAAGGCACTTTTCATCCTTTACTCACCTGAGGCTTAGCCCACTTCTTATGGAACAACAAAACTTCATAGAGTTTGAAAGATTTGTCAAGAGAATGCATGGGGAAACTGTTCATGATCTCCAACAGTAG 2088 0.4339 MATDMQRLVGTSEDDEEEMEMDVKEVDDDDYEEEENRGEHGIVLGMVEMDGRNGIVSVDGDNRFQQHQLFEDQVGTPGGGTRRCRPLEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSSSQGQRPTAGNSTTITSSSSHGPSQQTPSTSLGGVASGYRSSTKYNTCQMKGVFIPARSLDNPSMAGDGEEQRENRPLIGCSMHNVDAKQIVNIPPRLTERDLAGTPYIPVYMMLPLGVINLKCELVDPDGLLKQLNVLKSIDVDGIMVDCWWGIVEAHAPQEYYWNGYKRLFEIVHELKFKLQVVMSFHECGGNFGDDVCIPLPHWVVEIGRTNPDIFFTDRSGRHNPECLSWGIDKERVLRGRTALEVYFDFMRSFRVEFDEYFEEGFISMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYLSKSLRKAAEARGHSFWARGPDNVGTYNSQPHETGFFCDGGDYDGFYGRFFLSWYSQVLVDHGNRVLSLAKLAFQGSRVAAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYTAIMAMLKRNEVSLTIACTDLHTLNQHKVFPETYADPEGLVWQVLNAGWDVGLPVAGENALPCLDRVSYNKVLDNAKPMRDPDERHFSSFTHLRLSPLLMEQQNFIEFERFVKRMHGETVHDLQQ 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0922 695 MobiDBLite consensus disorder prediction 11 35 - -
Lal25g0922 695 Pfam BES1/BZR1 plant transcription factor, N-terminal 80 228 IPR008540 -
Lal25g0922 695 MobiDBLite consensus disorder prediction 1 36 - -
Lal25g0922 695 MobiDBLite consensus disorder prediction 145 184 - -
Lal25g0922 695 Gene3D Glycosidases 248 695 - -
Lal25g0922 695 PANTHER BETA-AMYLASE 77 695 - -
Lal25g0922 695 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 292 306 IPR001554 GO:0000272|GO:0016161
Lal25g0922 695 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 313 331 IPR001554 GO:0000272|GO:0016161
Lal25g0922 695 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 335 356 IPR001554 GO:0000272|GO:0016161
Lal25g0922 695 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 428 450 IPR001554 GO:0000272|GO:0016161
Lal25g0922 695 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 501 520 IPR001554 GO:0000272|GO:0016161
Lal25g0922 695 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 535 551 IPR001554 GO:0000272|GO:0016161
Lal25g0922 695 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 552 563 IPR001554 GO:0000272|GO:0016161
Lal25g0922 695 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 570 593 IPR001554 GO:0000272|GO:0016161
Lal25g0922 695 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 610 632 IPR001554 GO:0000272|GO:0016161
Lal25g0922 695 PANTHER - 77 695 IPR001554 GO:0000272|GO:0016161
Lal25g0922 695 Pfam Glycosyl hydrolase family 14 261 680 IPR001554 GO:0000272|GO:0016161
Lal25g0922 695 PRINTS Plant beta-amylase signature 418 427 IPR001371 GO:0000272|GO:0016161
Lal25g0922 695 PRINTS Plant beta-amylase signature 661 675 IPR001371 GO:0000272|GO:0016161
Lal25g0922 695 PRINTS Plant beta-amylase signature 676 690 IPR001371 GO:0000272|GO:0016161
Lal25g0922 695 SUPERFAMILY (Trans)glycosidases 254 691 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0922 Lal-Chr25 10070444 10082170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0922 1 690 Glycoside Hydrolase AT2G45880 64.521 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lal25g0922 Glyco_hydro_14 6e-103 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0922 K01177 - gmx:100805560 1109.75