Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0842 GTGAGTTTTAAGGAAGAAGGTGGAGTAGAAAAAGAATCCATGGTCAGGCCTCCTTGCTGTGACAAAGTCAGCATCAAGAAGGGTCCATGGACACCTGAGGAAGATATCATCCTTGTTTCTTACATCCAGGAACATGGTCCAGGAAATTGGAGAACAGTGCCTACTAGTACTGGGTTATCAAGGTGCAGCAAAAGTTGCAGGCTTAGATGGACAAATTACTTAAGGCCAGGAATCAAGAGAGGAAACTTCACTCCTCATGAGGAAGGAATGATAATTCATTTGCAAGCTCTACTGGGTAACAAATGGGCAGCCATAGCTTCCCTCCTTCCACAAAGAAGAGATAATGATATAAAGAATTATTGGAACACTCATCTAAAGAAGAAGATGAAAAAAATCCGAGTAGCATCAGACTCAACAACCATTGGTCAGTATTCATCAAAGAGTTTTAATTACAGTAGAAGTTTAGATATCAGCAGAAGCAATCATGGCTCATCCTTTAGACCAAGTCAGTCTCAGACTCATTCCTCCACTTATGCCTCAAGCACAGAAAATATCTCAAGGCTTCTACAAGGTTGGATGAGATCTTCTCCAAAACAGCCTCTCAAAGAAATAACACAAGAAGAAGAGAAGTTTCAAAGCTATGATGAGTTTGAAAACAGTAATAATATAGTGAAGTCTGCATCAGTGCCTGCTTCTTTGAACCTTCAGCTTCAGCAACACAAAACAAAAAATGAACATGATATGGTCTCACATGAAGAGTTTGATTCTATTTTGTCATTTGAGAACTTAAACAATGCTCCTTGGGACAAGTCTACTTGTGATTCTATGCCTGAAAACGTTTATGTAGCTTCTGTTAAGGGTGCAGAGAAGAATAGGGTAACATCTGAGAATAGCAATGCTCCTCCATTGTCATTTCTTGAGAAGTGGCTCTTGGATGAAAATGTTGGTCATGTAGAGGAGATGATACAATTATCTCCTATGTTCTAA 987 0.3941 VSFKEEGGVEKESMVRPPCCDKVSIKKGPWTPEEDIILVSYIQEHGPGNWRTVPTSTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASLLPQRRDNDIKNYWNTHLKKKMKKIRVASDSTTIGQYSSKSFNYSRSLDISRSNHGSSFRPSQSQTHSSTYASSTENISRLLQGWMRSSPKQPLKEITQEEEKFQSYDEFENSNNIVKSASVPASLNLQLQQHKTKNEHDMVSHEEFDSILSFENLNNAPWDKSTCDSMPENVYVASVKGAEKNRVTSENSNAPPLSFLEKWLLDENVGHVEEMIQLSPMF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0842 328 Gene3D - 81 149 - -
Lal25g0842 328 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 14 320 - -
Lal25g0842 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 78 IPR017930 -
Lal25g0842 328 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 129 IPR017930 -
Lal25g0842 328 PANTHER TRANSCRIPTION FACTOR MYB60 14 320 - -
Lal25g0842 328 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Lal25g0842 328 SUPERFAMILY Homeodomain-like 24 121 IPR009057 -
Lal25g0842 328 MobiDBLite consensus disorder prediction 160 180 - -
Lal25g0842 328 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Lal25g0842 328 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Lal25g0842 328 Pfam Myb-like DNA-binding domain 80 125 IPR001005 -
Lal25g0842 328 CDD SANT 82 125 IPR001005 -
Lal25g0842 328 Gene3D - 26 79 - -
Lal25g0842 328 CDD SANT 29 74 IPR001005 -
Lal25g0842 328 SMART sant 79 127 IPR001005 -
Lal25g0842 328 SMART sant 26 76 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0842 Lal-Chr25 7428897 7431267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0842 14 148 MYB Transcription Factor Family AT5G62470 77.778 5.41e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal25g0842 Myb_DNA-binding 2.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0842 K09422 - gmx:100817854 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0842 25 7428897 7431267 Lal10g0529 10 12724710 12726882 LSH