Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0808 ATGCCTCCCAGCTGGGGGGCGGATCGAATCGGAGTTTCCTTAGGTAGCCACCGACCTACAGTTATCCTTAAACTTCCGTGCTTGGTGGAGAAGAAGCGAACAAAGGTACGCTCGCTTGCTGTCTTGTTCTCTGCCGCGAACTGGGATCGCTCGCCAGCTAGGATCATCACAGCCTTCAACGACAACATATCTATCCAGTTACCAGAAACACCTTGGGACCTGACTGACTTCAAACCTTACTCTCCACACAGTGCTGTCATGGCTTGCAGCAGCAGCACCATTCACTTCAACTTTAATCTCACTTTCCCTTCCAATGCGCCACTTATTCCGTACACACTCTCTCACCTCTCACCCGCTCCTCTCTTCAACACTAAAAAGAAGGCAAAAACCAAAGCTTCAAATTTTTTTCTTCTGTTTTTTCCTTTTTGTTTGTTCCCCAGTGATTCCGAAAATAATGACCCTTTATTGTTTCTGTGTCACTCTCAGGTCTCTTTCTCCAGTGCTCCGCGTCGTACCATTGCTGCTGTGACCTCTCGCGTGACCATTGATGCGGACAAACCTGTCTCTGATAACCGAATGCTCGTGTTTGTTCCTCCACATCCGCTGATCAAACACTGGGTTTCTGTTTTGAGGAATGAGCAAACTCCGAGTCCCATCTTCAGAAATGCAATGGCTGAGTTGGGAAGACTACTAATGTATGAAGCTTCAAGGGATTGGTTGCCTACTGTTTCCGGAGAGATTCTATCACCAATGGGTGTTGCCTCAGTGGAGTTCATTGATCCAAGGGAGCCTGTGGCTGTAATTCCAATTTTGAGAGCTGGTCTTGCTCTTGCCGAACATGCGTCATCAATCTTGCCTGCAACAAAAACGTATCATTTAGCCTTGAATTCAGTGTTGCCATATGGCGGCCATGATGGGTTGCGGTGGTGGTTTGGGGGTTGCAGTTTATGGATATCAGATTTTCTGGGTCGAATAATGATATTTTTTCCTTTCTTATTTGCAAAAGGAATAATCAGAGATGAGGAAACACTTCAACCAACTATATATTTGAATAAATTACCTGAGAACTTTCCAGAAGGGTCTAAATTATTTGTGGTCGATCCTATGCTTGCAACGGGTGGTACTATAGTGGCTGCCCTGAGTCTATTGAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCATGTGCTGCCCCACCAGCCCTTCAAAAGCTGAGCGAACAGTTTCCTGGGCTTCACGTGTATACTGGAATAATTGATCCCACTGTTAATGACAAAGGGTTGGTGCCTCACAACAATATTGTAGTTACATTATTCGGAGTTGTCGCTAATATGTTTATAATTCCTGGCCTTGGAGATGCTGGGGACCGAAGCTATGGCACATGA 1395 0.4566 MPPSWGADRIGVSLGSHRPTVILKLPCLVEKKRTKVRSLAVLFSAANWDRSPARIITAFNDNISIQLPETPWDLTDFKPYSPHSAVMACSSSTIHFNFNLTFPSNAPLIPYTLSHLSPAPLFNTKKKAKTKASNFFLLFFPFCLFPSDSENNDPLLFLCHSQVSFSSAPRRTIAAVTSRVTIDADKPVSDNRMLVFVPPHPLIKHWVSVLRNEQTPSPIFRNAMAELGRLLMYEASRDWLPTVSGEILSPMGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLALNSVLPYGGHDGLRWWFGGCSLWISDFLGRIMIFFPFLFAKGIIRDEETLQPTIYLNKLPENFPEGSKLFVVDPMLATGGTIVAALSLLKERGVGNKQIKVISACAAPPALQKLSEQFPGLHVYTGIIDPTVNDKGLVPHNNIVVTLFGVVANMFIIPGLGDAGDRSYGT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0808 464 SUPERFAMILY PRTase-like 181 464 IPR029057 -
Lal25g0808 464 CDD PRTases_typeI 260 422 IPR000836 -
Lal25g0808 464 Pfam Uracil phosphoribosyltransferase 197 296 - -
Lal25g0808 464 Pfam Uracil phosphoribosyltransferase 336 464 - -
Lal25g0808 464 Gene3D - 318 464 IPR029057 -
Lal25g0808 464 Gene3D - 185 307 IPR029057 -
Lal25g0808 464 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 336 431 - -
Lal25g0808 464 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 153 295 - -
Lal25g0808 464 PANTHER URIDINE KINASE 336 431 - -
Lal25g0808 464 PANTHER URIDINE KINASE 153 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0808 Lal-Chr25 6873422 6883274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0808 164 464 PRT Gene Family AT3G53900 60.133 4.26e-116 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0808 K00761 - gmx:100797537 410.223