Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0741 ATGAATATCCTCTCTGCTGGATATCTCACACTGGAAGATCGTTTGGTTCATTATTTTCTTACCTATGTCATTTTTCCGAAATTTTCCAATCATTCGCAAATTAGTGACATAGAGCTCCATTTGATGTATGCTATTAAGTATAACATCAAGATAAATTGGGCTAAGATGATAATGCAACAAATGTGGCATGTTCGTGGCTCCCAAAGTCCGTTGCCCTACGCCATCTTCATTACAAAAATCCTTGAGCATTTCGGCGTATCTTTAGATGGTGAGACAAAAGTGGCCCTCAATCTTCGCGAAAGCAAGGTTGATGTTGAGGTTGTCCACAAGATGGGGTTTGTTATAGATCCTGTCACTCGTCGAACCTATAAACATCGCACTGACCGCCAAACTGCTCCTACCGACGAACCAGAACCTACTGCACCAAACGAGCCTGAGTCTCATGCTCCATCTTCTTCATCTTCTACAATGCCCACTAATCAGATGATTATGGATGAATTGGTTTCTCTTCGAGGCTACATCACCACAAGGATGGATGCTTTCGATACTCAGAGCCAACAAATCTATTATGAACTTCATTGTCTTTCATCGAGGCTGAGCAACATGGATGTTTATAAAGATAGTTCTGATCCCGAGCACATAACTCCAAAAGAAAGGGGGAGCATACATATAGGGGGAACATACTCAAGACAAGTCAAGATATATCATCCAATATGCTGCTCTCAGAATAATACACCTTCAAGAAAATATTGGTTTGTCATCATCAAAAAGGGGGAGATTGTGAAGAAGATCTTGCTCCTGACCTTGACAGGAAAAATTGGTCATCAATTTGCAACAACTAATTCACCCCTCCCCCTCTTAGTTGCAATCTCATTCTTACAAGCTTTCATCTCCCAATCAGCCATAAATTATACTAACCTTGCACATGTCCATGAAAATTCCAAGTCTTATGAAGATTTGGAGTTGGAGAAAGTGTTGCGAAAGAAGTTTGCGCGTAAAGATGAGGAGTATGACTCTCTGTTAGGTGTTGTTCGTGAGATCCCACCAGAGCTTATTCTTCCTGATAATGTCCTACCCGAAGAAAGGGTTCTCATTCTTAGTGAATTTGTTGGTGCTGCTCAGTCTCTTGGTGTTAGCGGAAATCTGGTCAATCCCTGGAACATCACTGAAGCTGCTATTACAATAGCCAAAGCCATGAATATGCCATCTCCCGAAAGAGAGAAGCGACATAGGCGTAACTTTCATCACCCCACATTGTTCAAGAATGGGCAGAAATGGCTTTTCTTTACTTTCTTGATTCTTGTGGTGGTTCTCTTGCCAATTGTTCCACCAGAGTCCCTTGTTTTAGCATGCAAGTTTGAACAGAAGCAACACTGTAATGAAGAATCTAAGAAGGAGAGACATATTGTGTCTTGGACTCTAAGAGTAGGATGA 1434 0.4142 MNILSAGYLTLEDRLVHYFLTYVIFPKFSNHSQISDIELHLMYAIKYNIKINWAKMIMQQMWHVRGSQSPLPYAIFITKILEHFGVSLDGETKVALNLRESKVDVEVVHKMGFVIDPVTRRTYKHRTDRQTAPTDEPEPTAPNEPESHAPSSSSSTMPTNQMIMDELVSLRGYITTRMDAFDTQSQQIYYELHCLSSRLSNMDVYKDSSDPEHITPKERGSIHIGGTYSRQVKIYHPICCSQNNTPSRKYWFVIIKKGEIVKKILLLTLTGKIGHQFATTNSPLPLLVAISFLQAFISQSAINYTNLAHVHENSKSYEDLELEKVLRKKFARKDEEYDSLLGVVREIPPELILPDNVLPEERVLILSEFVGAAQSLGVSGNLVNPWNITEAAITIAKAMNMPSPEREKRHRRNFHHPTLFKNGQKWLFFTFLILVVVLLPIVPPESLVLACKFEQKQHCNEESKKERHIVSWTLRVG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0741 477 Pfam Glycosyltransferase family 20 360 416 IPR001830 GO:0003824|GO:0005992
Lal25g0741 477 MobiDBLite consensus disorder prediction 123 159 - -
Lal25g0741 477 MobiDBLite consensus disorder prediction 145 159 - -
Lal25g0741 477 Gene3D Glycogen Phosphorylase B; 330 417 - -
Lal25g0741 477 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 363 416 - -
Lal25g0741 477 PANTHER DYNACTIN SUBUNIT P25 295 361 - -
Lal25g0741 477 PANTHER EXPRESSED PROTEIN 295 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0741 Lal-Chr25 6313877 6317938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0741 363 416 Trehalose Biosynthesis Gene Families AT1G78580 72.222 3.10e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0741 K01726 - pvu:PHAVU_009G0592000 115.546