Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0722 ATGAGGGAAGAAGATTCAAACTGGTTTTCAAGATGGGAAGAGGAACTACCCTCCCCAGAGGAACTCATGCCCTTATCTCAAACCCTAATAACCCCTGATCTTGCCATAGCCTTTGATATCACTACAAATAACAACAACAACAACAACATCATCATTCAACAACAGCAAAATCTTCAACTTCAACAACAACAACAACAACAACAAAGTCTTCATCTTCTGCAACAACAAATTCCAACAACACCTTCAAACCCCACTACCCAACAGCAACAACCCTCCTCCGGCGACTTTGCTGACTCCGGCGAGATAGGATCCGGCAACGGCGCTGATGAACCTGCCCGGACACTCAAGCGTCCGCGACTGGTGTGGACCCCGCAGCTCCACAAGCGATTCGTGGACGCCGTGGCGCATCTTGGCATCAAGAACGCCGTGCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGTTTAACCCGAGAGAACGTCGCGAGCCACCTTCAGAAATACCGCCTTTATCTTAAGCGAATGCAGGGGCTTTCCGGCGGCGGCTCAGGTGGTGGTGGCGGCGGTGGTGTTGATGCGGCAACTGATCACTTATTCGCCAGCTCGCCTGTGCCTGCGCATTTCTTGCATCCGGGGAGGACTAATTCGGATCACTTCTTGCCCTTTGTGCAGGTCCCTGCCCTTCAGCACCACCACCAGATGGCGGCAGCTGCTGTGACAGCTGTGCAGCATCCTCAGCTGCAGCAGCCGCAGTATCACAGGCAGGTGGGGCATTTCGGGTCACCACCGAATGGGCACTTTGAACATCCTTTCCTGTCTAGGCAGTCTCAACAGCAGCTTCATAGATTGGGAGCACCAGTGCACAGCCCTGTGGCTGGTTATGTCGAGGACAAGGAACCGGAGAATGCCTCGGGAGGAAGAAAGGTTCTTACTCTTTTTCCAACTGGAGATGATTGA 957 0.5298 MREEDSNWFSRWEEELPSPEELMPLSQTLITPDLAIAFDITTNNNNNNNIIIQQQQNLQLQQQQQQQQSLHLLQQQIPTTPSNPTTQQQQPSSGDFADSGEIGSGNGADEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGSGGGGGGGVDAATDHLFASSPVPAHFLHPGRTNSDHFLPFVQVPALQHHHQMAAAAVTAVQHPQLQQPQYHRQVGHFGSPPNGHFEHPFLSRQSQQQLHRLGAPVHSPVAGYVEDKEPENASGGRKVLTLFPTGDD 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0722 318 MobiDBLite consensus disorder prediction 77 116 - -
Lal25g0722 318 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 118 170 IPR006447 GO:0003677
Lal25g0722 318 Gene3D - 114 176 - -
Lal25g0722 318 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 318 - -
Lal25g0722 318 MobiDBLite consensus disorder prediction 297 318 - -
Lal25g0722 318 Pfam Myb-like DNA-binding domain 121 169 IPR001005 -
Lal25g0722 318 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 122 173 IPR017930 -
Lal25g0722 318 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 318 IPR044841 GO:0003700|GO:0006355
Lal25g0722 318 MobiDBLite consensus disorder prediction 77 99 - -
Lal25g0722 318 SUPERFAMILY Homeodomain-like 114 174 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0722 Lal-Chr25 6019404 6020360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0722 1 318 G2-like Transcription Factor Family AT3G10760 59.040 4.50e-104 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal25g0722 Myb_DNA-binding 2.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0722 - - rcu:8259679 392.504