Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0651 ATGAAGCGATATGTATACATCAATGATGGTGAATCATCACATGATTTATACTGTGATAATCGTATTTCAAATAGAAAATATACTGTATTGAACTTTCTTCCAAAAAATTTATGGGAACAGTTCAGCCGGTTTATGAACCAGTACTTTTTGCTGATAGCTTGCCTGCAGCTATGGCCTCTCATTACTCCAGTAAATCCTGCCAGTACTTGGGGTCCACTTATCTTTATTTTTGCAGTCTCCGCATCAAAAGAGGCGTTGGATGACTACAATAGATATCTTTCAGACAAGAAGGGAAATGAAAAGGACGTCTGGGTTGTGAGGAAGGGCGTCAAGCAACATGTCGAAGCCCAAGATATTCTTGTGGGTAATTTAGTATGGCTTCGTGAAAATGATGAAGTGCCTTGTGACCTTGTTTTGATTGGTACATCTGATCCTCAGGGAGTTTGCTATATAGAGGGTGTAATCGAGTGTCCCAGTCCAGATAAAGACATTAGAAGATTTGATGCAAACATGCGGTTGTTCCCCCCATTTATTGATAATGACATATGCCCTTTAACCTTTAAAAACATAGTTCTTCAGTCTTGTTACCTGCGGAACACTGAATGGGCATGCAATGAAACCAAGCTTGGCATGAGTAGAGGCATCCCAGAACCAAAGCTCACTGCTATGGATGCCATGATCGACAAGCTGATTGGTGCTATATTTGTATTTCAAATTGTTGTTGTTATGGTTCTTGGCATAGCGGGTAATGTTTGGAAGGATACAGAAGCGAAGAAACAATGGTATGTTCTTTACCCTGATGAAGGCCCTTGGTATGAACTATTGGTCATTCCTTTGCGGTTCGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTATCTCTGGATTTAGTAAAGAGCTTATATGCAAACTTTATTGATTGGGACCATCAGATGATTGACCTAGAGACTAGTATTCCATCTCATGCAACAAATACAGCAATAAGCGAGGACCTAGGGCAAGTTGAGTATATCTTGACTGACAAAACAGGCACCCTGACTGAGAATAAAATGATATTTAGAAGATGCTGTATCAATGGCATTTTCTATGGGAATGAGAATGGAGATGCATTGAAAGATTTAGAGCTTCTCAATGCTGTTTCCAGTGGTTTGCCAGACGTTGTACGATTTCTTACAGTTATGGCAATATGTAATACTGTCATACCTACACGAAGCAAATCTGGAGATATCTTGTATAAGGCACAGTCTCAGGATGAGGATGCTCTTGTTCATGCTGCTGCTTGGCTGGATATGGTTTTCTTCAATAAGAATGGAAATATTCTTGAAGTCAAGTTCAACTCCAAGATACTTCAGTATGAAGTTTTGGAAACCTTAGAGTTCACATCTGATAGGAAAAGAATGTCAGTGGTGTTGAAAGATTGCCAAAATGGAAAGATCCTTCTCCTGTCGAAAGGAGCAGATGAGGCTATTCTTCCATATGCTCGTGCTGGGAAGCAAACCCGAAACTTCATTGAAGCTGTGGAGCGGTATGCTCACTTGGGACTACGTACGCTATGTCTGGCTTGCCGTGAGTTGGACGAGGATGAATATCAAGAATGGTCTTTGATGTTTAAAGAGGCTAGTAGCACTTTGGTTGATAGAGAGTGGAGAGTTGCTGAGGTCTGCCAAAGAGTAGAGCATAACTTGGAAGTTCTTGGCGTAACAGCAATAGAGGATCGTTTACAGGATGGTGTCCCTGAAACTATAGAAACACTACGAAAAGCTGGAATAAATTTTTGGATGTTAACAGGAGACAAGCAGAATACCGCAATACAAATTGCCCTGTCATGTAATTTTATTTCTCCAGAACCAAAGGGGCAGCTTCTATCAATTGATGGAAAAACAAAGGACGAGGTTCGTAGAAGTCTAGAGAGAGTGCTCCTTACAATGCGGATAACTGCGTCAGAACCTAAGAATGTAGCTTTTGTTGTCGATGGTTGGGCTCTTGAGACTGCACTTAACCACTACCGTAAAGCTTTTACCGAGCTGGCAATATTGTCAAGGACTGCTATATGTTGTCGAGTGACACCATCACAAAAAGCACAGCTTGTACAGATCTTAAAATCATGTGACTATAGAACATTGGCAATTGGTGATGGTGGGAACGATGTAAGGATGATACAACAGGGTGATATTGGTGTGGGCATTAGTGGCAGAGAAGGATTGCAGGCAGCAAGAGCAGCTGATTACAGTATAGGAAGTGTCTCAGGAACCAGCCTCTTCAATTCTGTTAGTTTGATGGCTTATAATGTGTTCTACACCAGTATTCCTGTTCTAGTCAGTGTGCTTGACAAAGATCTTAGTGAGGAAACTGTGATGCAGCATCCTCAAATTTTATTTTATTGTCAAGCCGGGAGGCTTCTAAATCCTAGTACGTTTGCTGGATGGTTTGGGCGATCTCTCTTCCATGCAATAGTTGTATTTGTAATAAGTATACATGCTTATGCCTATGATAAAAGTGAAATGGAAGAGATATCAATGGTTGCCCTCTCCGGTTGTATATGGTTGCAGGCTTTTGTAGTAACAATGGAAACCAATTCCTTTACTATATTGCAATTTGTTGCTATATGGGGTAATTTGGCTTTCTTCTATGTCATCAACTGGATCTTCAGTGCTCTTCCTTCATCTGGGATGTATACAATTATGTTTCGGTTATGTCGACAACCATCATATTGGATAACAGTTTTTCTCATGGTTGCAGCCGGGATGGGTCCAGTTCTAGCCGTCAAGTACTTCCGATACACATATAGACCAAGCAAAATCAATGCACTTCAGCAGGCTGAACGTCTGGGTGGGCCAATCTTGTCGTTTGGCACCATCGAGCCTCAGCCTAGACCTATAGAGAAAGAAGTTTCTACCTTGTCAATAACACAACCCAAAGACAGAAACCCTGTGTTTGAACCTCTTCTATCAGATTCTCCGAATTCCACAAGATCTTTAGGAGCTGGAACAGCATTTGATTTCTTTCAGTCACAGTCAAGATTATCGCTTTGGGAACTTTATCATAGTACTTTAGTTTATTTTGTTAACAGAGCTCCTCTAAAGTGTTTTTATTATATAACTGCTAAAATGAAAGTTATATAA 3129 0.4059 MKRYVYINDGESSHDLYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSASKEALDDYNRYLSDKKGNEKDVWVVRKGVKQHVEAQDILVGNLVWLRENDEVPCDLVLIGTSDPQGVCYIEGVIECPSPDKDIRRFDANMRLFPPFIDNDICPLTFKNIVLQSCYLRNTEWACNETKLGMSRGIPEPKLTAMDAMIDKLIGAIFVFQIVVVMVLGIAGNVWKDTEAKKQWYVLYPDEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYANFIDWDHQMIDLETSIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDLELLNAVSSGLPDVVRFLTVMAICNTVIPTRSKSGDILYKAQSQDEDALVHAAAWLDMVFFNKNGNILEVKFNSKILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARAGKQTRNFIEAVERYAHLGLRTLCLACRELDEDEYQEWSLMFKEASSTLVDREWRVAEVCQRVEHNLEVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTKDEVRRSLERVLLTMRITASEPKNVAFVVDGWALETALNHYRKAFTELAILSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQGDIGVGISGREGLQAARAADYSIGSVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFVISIHAYAYDKSEMEEISMVALSGCIWLQAFVVTMETNSFTILQFVAIWGNLAFFYVINWIFSALPSSGMYTIMFRLCRQPSYWITVFLMVAAGMGPVLAVKYFRYTYRPSKINALQQAERLGGPILSFGTIEPQPRPIEKEVSTLSITQPKDRNPVFEPLLSDSPNSTRSLGAGTAFDFFQSQSRLSLWELYHSTLVYFVNRAPLKCFYYITAKMKVI 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0651 1042 ProSitePatterns E1-E2 ATPases phosphorylation site. 343 349 IPR018303 -
Lal25g0651 1042 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 933 IPR023298 -
Lal25g0651 1042 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 678 743 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal25g0651 1042 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 561 623 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal25g0651 1042 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Lal25g0651 1042 SFLD p-type atpase 324 749 IPR044492 -
Lal25g0651 1042 SUPERFAMILY HAD-like 330 750 IPR036412 -
Lal25g0651 1042 Gene3D - 564 749 IPR023214 -
Lal25g0651 1042 SFLD Haloacid Dehalogenase 324 749 - -
Lal25g0651 1042 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 348 535 IPR023299 GO:0000166
Lal25g0651 1042 Gene3D - 80 156 - -
Lal25g0651 1042 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 749 974 - -
Lal25g0651 1042 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 347 749 - -
Lal25g0651 1042 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 153 292 - -
Lal25g0651 1042 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 152 - -
Lal25g0651 1042 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 152 - -
Lal25g0651 1042 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 347 749 - -
Lal25g0651 1042 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 153 292 - -
Lal25g0651 1042 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 749 974 - -
Lal25g0651 1042 Gene3D - 413 545 IPR023299 GO:0000166
Lal25g0651 1042 PRINTS P-type cation-transporting ATPase superfamily signature 341 355 - -
Lal25g0651 1042 PRINTS P-type cation-transporting ATPase superfamily signature 590 600 - -
Lal25g0651 1042 PRINTS P-type cation-transporting ATPase superfamily signature 712 731 - -
Lal25g0651 1042 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 152 748 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lal25g0651 1042 Pfam Phospholipid-translocating P-type ATPase C-terminal 749 934 IPR032630 -
Lal25g0651 1042 SUPERFAMILY Calcium ATPase, transduction domain A 101 152 IPR008250 -
Lal25g0651 1042 Pfam Cation transport ATPase (P-type) 398 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0651 Lal-Chr25 5058765 5083294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0651 1 1004 Primary Pumps ATPases AT5G44240 77.298 0.0 1740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0651 K01530 - gmx:100786505 1835.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0651 25 5058765 5083294 Lal25g0651 25 5058765 5083294 ECH