Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0610 ATGGATGATTCTATATCCACCCTTCTTTGCCAAGAAAATGTAACATTCTTGGAAGGTGAGTTGGGAAATGAAGAGTATCCTTTGATTCCATTATTACCTGACTATGGTGTTTTTTCAGAGGATGAGTATATAGCCATTTTGATTGAGAGAGAGATCAGGTTTGGTTTGAAGAAGGATGAATCTTCTGTGTTTGAGAATTCGATCAAACGAGCCCGCGTGGACGCGATCAATTGGATTTTCAAAACAAGAACAGCATTGGGATTTTACTTTCAAACAGCTTATTTGTCTGTCACATACTTCGACCGATTCCTTTCAAACCGATCCGTTGATAATGGTGAGTACTGGGCAATCCGGTTACTTTCTGTTGCATGTCTTTCTCTAGCTGCAAAAATGGAAGAGTGCAATGTGCCATTTCTATTGGAGTATCAATCAGAAGGTTATTGCTTTGAGAATAAGGTGATTCAAAGAATGGAGCTTTTGGTGCTTACCACATTGCAATGGAATATGGCTATTGTTACTCCTTTAGCTTTTCTTCCTTATTTCATCACCAAGTTATGCAATGAAACCCCACCATGTAATATTTTGTCCAACACTATGCAACTAATCTTCACATTGATGAAAGAGGTCAATTTAATGGACCATAGACCATCCGTTATCGCAGCCGCGGCTACTTTGCTGGCAGTGGATCAGCAATTGACAACAGAAGCAGTAAAGTTGAAGATGAGTTCAATTCATCAGTATATATTTCTTGACCCTAAAGATATATTTGCATGTTATAATCAAATTCGGAGTTTATACTCGGGGAAAACTAGAAGAGGCAAGCTTGTACATTCTTCTGGTCCTTCTTCACCTATTCAGTCTAGGCCAATTGGCATGATAGAAAGCTCTCTAGTTACTTCTGTTGCCATGACCAAGAGAAGAAGACTTACAGTCAATGATGGTAAAGAAAGTTGTGCTGTGAAGAAACTCCTCTAA 975 0.3887 MDDSISTLLCQENVTFLEGELGNEEYPLIPLLPDYGVFSEDEYIAILIEREIRFGLKKDESSVFENSIKRARVDAINWIFKTRTALGFYFQTAYLSVTYFDRFLSNRSVDNGEYWAIRLLSVACLSLAAKMEECNVPFLLEYQSEGYCFENKVIQRMELLVLTTLQWNMAIVTPLAFLPYFITKLCNETPPCNILSNTMQLIFTLMKEVNLMDHRPSVIAAAATLLAVDQQLTTEAVKLKMSSIHQYIFLDPKDIFACYNQIRSLYSGKTRRGKLVHSSGPSSPIQSRPIGMIESSLVTSVAMTKRRRLTVNDGKESCAVKKLL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0610 324 SUPERFAMILY Cyclin-like 155 261 IPR036915 -
Lal25g0610 324 SMART Cyclin_C_2 172 301 IPR004367 -
Lal25g0610 324 ProSitePatterns Cyclins signature. 72 103 IPR006671 -
Lal25g0610 324 Gene3D - 171 262 - -
Lal25g0610 324 Gene3D - 65 170 - -
Lal25g0610 324 Pfam Cyclin, N-terminal domain 46 169 IPR006671 -
Lal25g0610 324 PANTHER CYCLIN-D5-1 41 286 - -
Lal25g0610 324 PANTHER CYCLINS 41 286 IPR039361 -
Lal25g0610 324 Pfam Cyclin, C-terminal domain 172 269 IPR004367 -
Lal25g0610 324 SMART cyclin_7 77 163 IPR013763 -
Lal25g0610 324 CDD CYCLIN 72 162 IPR013763 -
Lal25g0610 324 SUPERFAMILY Cyclin-like 38 169 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0610 Lal-Chr25 4606490 4608628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0610 3 247 Core Cell Cycle Gene Families AT4G37630 35.496 1.14e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0610 K18811 - gmx:100798728 348.591