Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0555 ATGTTTCATCGTTGGAGCAATTCACAACAAGACCAAAAAAGCAAAGAGCTTTATGCTGAATCCAAGGTTAAAGAGCTAAAGGATGCAATTGGGTCCTTATCTGGACACAGCTTGAAGTATTGCACTGATGCTTGTTTGAGGAGATATCTAGAAGCTAGAAACTGGAATGTAGACAAGTCCAAGAAGATGTTGGAGGACACACTCAGGTGGAGATCAACCTTTAAGCCTGAGAAAATCCGTTGGATGTATAATGAAATAAAGCTAATTGCATATATTAAGGATGAGGTTGCAATGGAAGGGGAGACAGGGAAATTGTACAGAGCAACTTTTCATGACAGACAAGGAAGGACTGTTCTTATTTTGAGACCTGGAATGCAGAACACATCCTCAATGGAGAATCAGATGCGTCATCTAGTGTATCTTTTGGAAAATGCTATGCTGAACCTTCCACCAGATCAAGAACAAATGGCATGGTTGATAGATTTCACAGGGTGGTCAATATCCAACACACCCATTAAATCAACAAGAGAAACCATTAACATTCTACAGAATCATTATCCTGAGAGGCTTGCCATTGCATTTCTTTACAACCCACCTCGTGTTTTTGAAGCTTTTTGGAAGATAGTGAAGTATTTCTTGGATAACAAGACATTTCAAAAGGTGAAGTTTGTCTATCCAAAAAATAAAGATAGTGTGGAACTCATGAGGTCTCATTTTGATGAAGAAAATCTTCCCAAAGAATTTGGAGGAAAGAGCATATTGACCTATAACTATGAGGACTTTTCCAGATTAATGGCTCAGGATGATTTGAAATGTGTAGCCTTTTGGGAGTCTGATAACAATCTTACAAACCATATTGACAATGAGAATTCTGTAGCATAA 882 0.381 MFHRWSNSQQDQKSKELYAESKVKELKDAIGSLSGHSLKYCTDACLRRYLEARNWNVDKSKKMLEDTLRWRSTFKPEKIRWMYNEIKLIAYIKDEVAMEGETGKLYRATFHDRQGRTVLILRPGMQNTSSMENQMRHLVYLLENAMLNLPPDQEQMAWLIDFTGWSISNTPIKSTRETINILQNHYPERLAIAFLYNPPRVFEAFWKIVKYFLDNKTFQKVKFVYPKNKDSVELMRSHFDEENLPKEFGGKSILTYNYEDFSRLMAQDDLKCVAFWESDNNLTNHIDNENSVA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0555 293 Pfam CRAL/TRIO, N-terminal domain 37 66 IPR011074 -
Lal25g0555 293 PANTHER RANDOM SLUG PROTEIN 5-LIKE 6 282 - -
Lal25g0555 293 Gene3D - 3 284 IPR036865 -
Lal25g0555 293 SUPERFAMILY CRAL/TRIO domain 94 263 IPR036865 -
Lal25g0555 293 CDD SEC14 111 251 IPR001251 -
Lal25g0555 293 Pfam CRAL/TRIO domain 111 250 IPR001251 -
Lal25g0555 293 PANTHER GH16843P 6 282 - -
Lal25g0555 293 SUPERFAMILY CRAL/TRIO N-terminal domain 19 81 IPR036273 -
Lal25g0555 293 SMART sec14_4 99 253 IPR001251 -
Lal25g0555 293 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Lal25g0555 293 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 93 256 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0555 Lal-Chr25 4050803 4057066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0555 46 245 Acyl Lipid Metabolism Gene Families AT5G47730 27.442 2.13e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0555 - - lang:109347670 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0555 25 4050803 4057066 Lal25g0555 25 4050803 4057066 ECH
Lal8g0584 8 4059902 4062471 Lal25g0555 25 4050803 4057066 LSH