Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0551 ATGAGTTTGAGGGAAGAAAATGAGGATTTGAAGAAACCATTCCTACACACAGGAAGCTGGTATCGTATGAATAGTGCTTCTAGAGAAAATAGTGTGTTTAGTTCAACACAGGCCATTCGTGATGCTTCTATCTCTGTCTTTGTTTGTGTTCTTGTTGTTGCTTTAGGTCCTATTCAGTTTGGTTTCACAGCTGGTTATACATCACCTACACAATCTGCTATTATCAATGATCTTGGTCTCACAGTTTCTGAGTTCTCTTTGTTTGGTTCATTATCCAATGTTGGTGCCATGGTTGGAGCAATAACTAGTGGTCAGATTGCTGAGTATATAGGGCGAAAAGGGTCTTTGATTATTGCATCTGTTCCAAATATTATTGGTTGGTTGTTCATCTCATTTGCAAAAGACACTAATTTTCTCTATATGGGAAGATTGTTGGAAGGATTTGGTGTTGGAATAATATCTTACACGGTACCTGTATATATAGCTGAGATAGCACCTCAAAACTTGAGGGGAAGACTTGTTTCAGTTAACCAGCTCTCTGTCACCATTGGAATTATGTTGGCTTATTTGCTGGGAATTTTTGTTGAATGGAGAATACTTGCAGTTTTAGGAGTTTTACCATGTGCATTATTGATACCTGCTTTATTCTTCCTTCCCGAGTCTCCTAGATGGCTGGCAAAAATGGGAATGGCAGAAGAATTCCAAACAGCTTTACAAGTGCTTAGAGGTTTTGATACTGATATTTCTTTGGAAGTAAATGAAATTAAGAGATCTCTTCCATCAACAAACAGAAGAACTGCAATTCGATTTGCAGAACTCACACAAAGAAGATATTGGCTTCCCTTAATGATTGGAATTGGACTACTTATTTTGCAACAGCTATCTGGAATCAATGCTGTTCTTTTCTATTCCACTACCATCTTTCAAAATGCTGGTATTAGTTCTAGTGATGTAGCTACATTTGGAGTTGGTGCTGTTCAGGTTCTTGCCACTTGTGTAACATTGTGGTTGGCAGATAAAGCTGGTCGCAGAATTCTACTTCTTGTCTCTTCAGGTGCAATGACTTTTAGTCTCTTAGTTGTGTCAATCGCATTCTATGCGAAGAACTATGTTCCAGAGGGTTCTTCTTTACATGGGATACTGAGTATCTTGTCAGTGGTTGGAGTTGTGGTTATGGTTATTGCATTCTCTCTAGGACTGGGAGCTATACCATGGATTATAATGTCTGAGATTCTTCCTGTAAACATTAAAAGTCTAGCAGGAAGTGTTGCAACACTTGCCAACTGGCTCTTTTCCTGGTTGGTTACATTGACTGCAAATATGCTCTTGAACTGGAGCTCTGGAGGAACCTTTACCATATATACAGTAGTAAGTGCTTTGACAGTAGGGTTTGTTGCTATTTGGGTTCCTGAGACAAAAGGGAAAACTCTTGAAGAAATCCAATTGTTTTTCAAATGA 1458 0.3868 MSLREENEDLKKPFLHTGSWYRMNSASRENSVFSSTQAIRDASISVFVCVLVVALGPIQFGFTAGYTSPTQSAIINDLGLTVSEFSLFGSLSNVGAMVGAITSGQIAEYIGRKGSLIIASVPNIIGWLFISFAKDTNFLYMGRLLEGFGVGIISYTVPVYIAEIAPQNLRGRLVSVNQLSVTIGIMLAYLLGIFVEWRILAVLGVLPCALLIPALFFLPESPRWLAKMGMAEEFQTALQVLRGFDTDISLEVNEIKRSLPSTNRRTAIRFAELTQRRYWLPLMIGIGLLILQQLSGINAVLFYSTTIFQNAGISSSDVATFGVGAVQVLATCVTLWLADKAGRRILLLVSSGAMTFSLLVVSIAFYAKNYVPEGSSLHGILSILSVVGVVVMVIAFSLGLGAIPWIIMSEILPVNIKSLAGSVATLANWLFSWLVTLTANMLLNWSSGGTFTIYTVVSALTVGFVAIWVPETKGKTLEEIQLFFK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0551 485 PANTHER - 12 483 - -
Lal25g0551 485 TIGRFAM SP: MFS transporter, sugar porter (SP) family 23 480 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal25g0551 485 ProSitePatterns Sugar transport proteins signature 2. 145 170 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal25g0551 485 Gene3D MFS general substrate transporter like domains 39 485 IPR036259 -
Lal25g0551 485 Pfam Sugar (and other) transporter 50 482 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lal25g0551 485 PRINTS Sugar transporter signature 57 67 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal25g0551 485 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal25g0551 485 PRINTS Sugar transporter signature 292 302 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal25g0551 485 PRINTS Sugar transporter signature 386 407 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal25g0551 485 PRINTS Sugar transporter signature 409 421 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lal25g0551 485 SUPERFAMILY MFS general substrate transporter 50 481 IPR036259 -
Lal25g0551 485 ProSitePatterns Sugar transport proteins signature 1. 334 351 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal25g0551 485 CDD MFS_GLUT6_8_Class3_like 47 479 IPR044775 GO:0008643|GO:0051119
Lal25g0551 485 PANTHER SUGAR TRANSPORTER ERD6-LIKE 6 12 483 - -
Lal25g0551 485 ProSitePatterns Sugar transport proteins signature 1. 103 120 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lal25g0551 485 ProSiteProfiles Major facilitator superfamily (MFS) profile. 49 473 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0551 Lal-Chr25 4016361 4023121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0551 1 485 Organic Solute Cotransporters AT1G75220 73.211 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0551 K03444 - gmx:100793493 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0551 25 4016361 4023121 Lal25g0551 25 4016361 4023121 ECH
Lal8g0577 8 4003786 4007821 Lal25g0551 25 4016361 4023121 LSH