Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0533 ATGGCTTTAGGAAAATCAAGTAAGCTTCCACAAAAAGCACTTATTAAGCAAATTCTGAAGAGATGCTCAAGTCTAGGGAAGAAACAAGGCTATGATCATGATCAAGGGGTATGTTTGGATGTTCCAAAAGGTCACTTTGTTGTCTATGTTGGAGAAAACAGAAGCAGGTATATTGTTCCAATATCTATTCTAAGTAGACCAGAGTTCCAAACGTTGCTCCATAAAGCTGAAGAAGAGTTTGGCTTTGATCACGAAAAGGGTCTCATAATTCCTTGTGATGAAGATGTTTTTGAGTCTCTCACATCCATGCTAAGATGCAATTAA 324 0.3765 MALGKSSKLPQKALIKQILKRCSSLGKKQGYDHDQGVCLDVPKGHFVVYVGENRSRYIVPISILSRPEFQTLLHKAEEEFGFDHEKGLIIPCDEDVFESLTSMLRCN 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0533 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 105 IPR003676 GO:0009733
Lal25g0533 107 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 105 - -
Lal25g0533 107 Pfam Auxin responsive protein 33 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0533 Lal-Chr25 3832783 3833106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0533 3 106 Calmodulin-binding Proteins AT4G34750 40.952 1.35e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0533 K14488 - gmx:100778552 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0533 25 3832783 3833106 Lal25g0533 25 3832783 3833106 ECH