Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0524 ATGAGAAATTCTGAAGCAACTCATGTGGCTATGGAAATAGAAGCAAACAAACCTACAGAGAATGTAACAACAACACTTCCAGGGTTAAGTCCTTTGAGTGAAACCCTATGGAGAGAAAAGACAGACACAGAAATGATTGGAGATGTTTCTGCAAGACTCACATGGAAGGATCTAACTGTAATGGTTACTCTTAGTAATGGAGAGACTCAGAATGTTTTAGAGGGTTTAACTGGTTATGCTGAACCTGGTACTTTCACTGCTCTTATGGGACCATCTGGTTCAGGAAAATCTACTCTTCTTGATGCACTTTCTAGTCGCCTTGCAGCAAATGCTTTTCTCTCAGGAACCATTCTTCTTAATGGTCGCAAAGCTAAACTCTCTTTTGGCACTGCTGCTTATGTGACACAAGATGACAACTTAATTGGAACCCTAACAGTAAGAGAAACGATATCATATTCAGCACGTTTACGTTTACCTGATAAGATGGCATGGTCAGATAAAAGAGCTTTGATTGAAAGTACCATTGTTGCAATGGGTCTTCAAGATTGTGCTGACACAGTGATTGGGAATTGGCACTTGCGTGGGATAAGTGGTGGAGAAAAGAGAAGAGTTAGTATTGCATTGGAAATCTTGATGAGACCTAGATTGCTTTTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTTCTGCTTTCTTTGTAACTCAGACACTACGTGCCTTAGCAAGAGATGGAAGAACTGTGATAGCTTCTATTCATCAACCTAGTAGTGAAGTGTTTGAACTATTTGATCAATTGTACTTGCTTTCTGGTGGAAAAACTGTTTATTTTGGTCAGGCTTCTGAGGCATATGAGTTCTTTGCACAAGCTGGTTTTCCATGTCCTGCTTTGAGAAACCCATCAGATCATTTCCTTAGGTGTGTCAATTCTGATTTTGACAAAGTAAAGAGCACTCTTAAAGGCTCTATGAAATTAAAGTTTGAAGGAAGTGATGATCCCATAGACAAGATCACTACTGCTGAAGCTATAAAAACTCTTCTGGACTTCTACCGCACTTCTCAGCAATCTCATGCTGCAAGACAAAAAGTTGATGAAATATCCAAAGTTAAGGGGACTGTTCTTGATGGAGGAGGAAGTCAAGCTAGTTTCTTCATGCAGTCTTATATCTTAACCAAACGCTCATTCATCAACATGTTAAGAGATTTTGGTTACTACTGGCTTAGGCTTGTAATCTACATTGTGGTCACTCTCTGCATTGGAACCATTTATTTTAATGTGGGGACAGGCTACAACTCAATTCTGGCTAGAGGTTCATGTGCTTCTTTTGTCTTTGGTTTTGTCACCTTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGATATGAAGGTTTTTCAAAGGGAGAGGCTTAATGGACACTATGGTGTCCTTGGATTTGTGATCAGCAACACAATATCGGCGACGCCGTTCCTGATATTGATCACCTTTCTGTCAGGAACAATTTGTTACTTCATGGTTAGCCTGCATCCTGGCTTTTTGCATTACCTGTTTTTTGTGCTGTGCCTTTATGCCAGTGTCACAGTGGTTGAAAGCTTAATGATGGCAATTGCTAGTGTAGTCCCTAACTTCCTCATGGGCATCATAATTGGTGCAGGGATTCAGGGCATATTCATGTTGGTCTCTGGCTACTTTAGGCTCCCACATGATATCCCAAAGCCGGTATGGCGCTACCCGATGTCATACATCAGTTTCCACTTTTGGGCATTACAGGGGCAATACCAGAATGATCTCCGAGGATTGATATTCGACAACCAGACACCCGACCTTCCTAAGATACCGGGTGAATACATCCTCGAGAATGTGTTTCAGATTGATGTCAGCCGATCAAAGTGGATAGACTTAATTGTAATCTTAAGCATGATCATCATATACCGCATTATTTTCTTCATCATGATCAAAATCAATGAGGATGCGACTCCTTGGGTTAGAGGGTACTTAGCTCGGAGAAGAATGCAAAAGAAAAGTGGAGCTCAAAATACAACTATTGCACCTTATGTTCTAACTCAATCTCCATCTCTGAGAGCCTATATTTCCAGCCAAACAAAAAATGGCACTTCAAGAAGTTAG 2127 0.4067 MRNSEATHVAMEIEANKPTENVTTTLPGLSPLSETLWREKTDTEMIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMAWSDKRALIESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCVNSDFDKVKSTLKGSMKLKFEGSDDPIDKITTAEAIKTLLDFYRTSQQSHAARQKVDEISKVKGTVLDGGGSQASFFMQSYILTKRSFINMLRDFGYYWLRLVIYIVVTLCIGTIYFNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVLGFVISNTISATPFLILITFLSGTICYFMVSLHPGFLHYLFFVLCLYASVTVVESLMMAIASVVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLRGLIFDNQTPDLPKIPGEYILENVFQIDVSRSKWIDLIVILSMIIIYRIIFFIMIKINEDATPWVRGYLARRRMQKKSGAQNTTIAPYVLTQSPSLRAYISSQTKNGTSRS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0524 708 Pfam ABC transporter 75 224 IPR003439 GO:0005524
Lal25g0524 708 Pfam ABC-2 type transporter 253 309 IPR043926 GO:0140359
Lal25g0524 708 Gene3D - 44 291 IPR027417 -
Lal25g0524 708 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 290 IPR027417 -
Lal25g0524 708 CDD ABCG_EPDR 50 278 - -
Lal25g0524 708 PANTHER OS04G0528300 PROTEIN 2 698 - -
Lal25g0524 708 SMART AAA_5 82 253 IPR003593 -
Lal25g0524 708 ProSitePatterns ABC transporters family signature. 196 210 IPR017871 GO:0005524
Lal25g0524 708 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 2 698 - -
Lal25g0524 708 Pfam ABC-2 type transporter 386 592 IPR013525 GO:0016020|GO:0140359
Lal25g0524 708 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 296 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0524 Lal-Chr25 3752158 3761987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0524 83 257 Calmodulin-binding Proteins AT2G36910 33.871 1.82e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0524 K05681 - gmx:100803731 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0526 8 3590739 3596304 Lal25g0524 25 3752158 3761987 LSH
Lal25g0524 25 3752158 3761987 Lal10g0894 10 16432823 16438559 LSH