Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0523 ATGAACTTGGCCTTTAAAATAAGCTTTTTCTATGTTATCATATTGTCAATTTTCTTGAACATGGTCTTGTGTGTTGATACTGATCTGAATGATTTTCAAGCAGAAGAAAGAAATGCTTTATTGCTCATAAGGGATTCTTTAAATTCTTCATCTGATTTGCTTATGAATTGGACAGGTCCTCCTTGTATAGAAAATATTAGTAGATGGTTTGGTATAAATTGTTCCAATTTGCATGTTGTTCATATTGTTCTTGAAGGGATTAACCTTAGTGGCTCTTTACCTTCTAGATGCCTTCAGAACATAACTTTCTTGAGCCAAATTAACTTGAGAAACAATGCAATTTTTGGTCCACTTCCAAACCTCAAAAATTTGATGTTTTTGGAACAAGTTCTGCTCTCAAATAATCATTTCTCAGGGCCAATTCCTTTGGAATATGTTGAACTTCCTATTCTAGAAGTGTTGGAGCTGCAAGAAAATTACTTGGATTGGAAAATTCCACCCTTTGATCAACCATCATTGACAAGTTTCAATGTGTCCTACAATCATCTGGTAGGGCCAATTCCCGAGACTTCTGTGCTCGAAAGGTTCCGAAAAAGTGCATTCGATAACAATTCCGATATTTGTGGAAAGCCATTGGATACTATATGCCCTTCTGCTCCATCTCCTGCTCCAAGCTCAGAAGTCGAAAAAAATAACAAGAGATTCCATGTTTGGATCATTGCTTTGGTTGCTGCTGCAGCTGCACTATTTCTCTTCCTGATCATTATTGCTATCCGGTTTAAAAAGCGGCCGAGCAAAAAAGAAACAAGAAGAAATGGTTCAGCAAGGTATGTTTTTGGAGCATGGGCAAAGAAGATGGTGACTTATGATGAGACAAATGAAGATTCAGAAAGATTAGGAAGGTTGGAATTTTGCAACAAGAAATTTGCAGTTTTTGACATAGATGATTTATTAAGGGCATCAGCAGAAGTACTAGGAAAAGGAAATTTAGGCATGACATACAAAGCAACACTTGAAAATGGTATAGCTGTTGTAGTAAAGAGACTAAATTACATGAATGAATTGAGCAATAGGGAATTTCTACAGCAGATGCAATTGCTAGGAAATATGAAGCATAAGAATGTAGTAGAAATTGTTTCCTTTTATTATTCAGAGGAGCAGAAGTTGGTCATATATGAACTTATCTCTGATGGCACATTGTTTGAGCTCTTACATGAGGGTAGAGGAATTGGAAGAATAACTATTGATTGGACTACAAGACTAGCTATTATCAAAGACATTGCAAAGGGTCTTGATTTTCTTCATCATTCAATGTCTTCTCATAAGGTTCCTCATGCAAATCTCAAATCATCAAATGTCCTAATCCACCATGATAACCAAGGTTACCATTCTAAGCTCACAGACTATGGCTTCTTACCTTTACTTCAATCTAAACTTTATGCAGAAAAGTTAGCCATAAGTAAGTCACCAGAATTTTTTCAAGGGAAGAAGTTGACACACAAAAGTGATGTATATTGCTTTGGTATAATCATCCTAGAGATTATAACAGGAAAAATTCCTGGTCAAATCTTAGGTGAAATTGAAGAAACAACCAATGATCTTTCAAGTTGGGTAAGAAATGCTGTGAGCAATGATTGGTCTACAGATATACTTGATCTAGAAATACTAGCAGAAAAAGAAGGGCATGATGCAATGTTGAACCTTACAGAGTTAGCTCTTGAATGTACTGATATAACACCAGAGAAAAGGCCTAAAATGAGTGCAGTGTTGAGGAGAATAGAAGAGTTAGAGCAAATGAAATTAGAGAATAACTGA 1815 0.3581 MNLAFKISFFYVIILSIFLNMVLCVDTDLNDFQAEERNALLLIRDSLNSSSDLLMNWTGPPCIENISRWFGINCSNLHVVHIVLEGINLSGSLPSRCLQNITFLSQINLRNNAIFGPLPNLKNLMFLEQVLLSNNHFSGPIPLEYVELPILEVLELQENYLDWKIPPFDQPSLTSFNVSYNHLVGPIPETSVLERFRKSAFDNNSDICGKPLDTICPSAPSPAPSSEVEKNNKRFHVWIIALVAAAAALFLFLIIIAIRFKKRPSKKETRRNGSARYVFGAWAKKMVTYDETNEDSERLGRLEFCNKKFAVFDIDDLLRASAEVLGKGNLGMTYKATLENGIAVVVKRLNYMNELSNREFLQQMQLLGNMKHKNVVEIVSFYYSEEQKLVIYELISDGTLFELLHEGRGIGRITIDWTTRLAIIKDIAKGLDFLHHSMSSHKVPHANLKSSNVLIHHDNQGYHSKLTDYGFLPLLQSKLYAEKLAISKSPEFFQGKKLTHKSDVYCFGIIILEIITGKIPGQILGEIEETTNDLSSWVRNAVSNDWSTDILDLEILAEKEGHDAMLNLTELALECTDITPEKRPKMSAVLRRIEELEQMKLENN 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0523 604 SUPERFAMILY L domain-like 35 194 - -
Lal25g0523 604 ProSiteProfiles Protein kinase domain profile. 319 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0523 604 Gene3D Ribonuclease Inhibitor 33 217 IPR032675 -
Lal25g0523 604 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 12 598 - -
Lal25g0523 604 SUPERFAMILY Protein kinase-like (PK-like) 323 593 IPR011009 -
Lal25g0523 604 Gene3D Transferase(Phosphotransferase) domain 1 395 604 - -
Lal25g0523 604 Gene3D Phosphorylase Kinase; domain 1 285 394 - -
Lal25g0523 604 Pfam Protein kinase domain 322 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0523 604 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 598 - -
Lal25g0523 604 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0523 Lal-Chr25 3746157 3750311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0523 36 596 Receptor kinase-like Gene Family AT3G42880 33.172 2.92e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal25g0523 PK_Tyr_Ser-Thr 1.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0523 - - gmx:102668068 831.632