Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0486 ATGGAACAACCAAAGTCTCTGATGGAGAATCTTCTTGGCCTTCTAAGGGTTCGTGTCAAGCGTGGTATTAACCTTGCTGTTCGTGATGTTCGTAGCAGTGATCCTTATGTTGTTCTTAAGATGGGAAAACAGAAACTTAAGACTCGTGTTATTAAAAAGAATGTGAATCCTGAGTGGAATGAAGACATTACCTTCTCTGTTTTAGATCCTAATCTTCCAATCTTACTGACTGTGTATGACCATGACACATTTAGCAAAGATGACAAAATGGGAGATGCAGAAATCGAAATGTTACCATTTATAGAAGCGTTGAGGATGAACATAAGTGGCCTCCCAAGTGGTACTGTAATCTCAAGAATACAACCAAGCAAACAAAACTGCATGGCTAATGAAAGCTGCATCACTTACACCAGTGGAAAAGTTATCCAAGATATTATACTTAGATTGCGAAATGTTGAATGTGGTGAAGTGGAAATCCAATTGCATTGGATTGATCTTCCTGGTTGTAAGGGTTTATGA 519 0.3854 MEQPKSLMENLLGLLRVRVKRGINLAVRDVRSSDPYVVLKMGKQKLKTRVIKKNVNPEWNEDITFSVLDPNLPILLTVYDHDTFSKDDKMGDAEIEMLPFIEALRMNISGLPSGTVISRIQPSKQNCMANESCITYTSGKVIQDIILRLRNVECGEVEIQLHWIDLPGCKGL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0486 172 Pfam C2 domain 13 98 IPR000008 -
Lal25g0486 172 SMART C2_3c 14 109 IPR000008 -
Lal25g0486 172 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Lal25g0486 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 171 IPR044562 -
Lal25g0486 172 CDD C2_ArfGAP 12 155 - -
Lal25g0486 172 PRINTS C2 domain signature 29 41 IPR000008 -
Lal25g0486 172 PRINTS C2 domain signature 53 66 IPR000008 -
Lal25g0486 172 PRINTS C2 domain signature 74 82 IPR000008 -
Lal25g0486 172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 151 IPR035892 -
Lal25g0486 172 Gene3D C2 domain 9 168 IPR035892 -
Lal25g0486 172 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 5 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0486 Lal-Chr25 3395993 3398798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0486 45 172 C2H2 Transcription Factor Family AT1G70790 60.000 1.84e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0486 - - lang:109340065 316.62