Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0481 ATGTCATGGCGTAGCTACTGCATTTGTTTCACAATCTGCACCCTTATAACCATATTACCTGTAATCTTCATTGAAATATTTTCCCCCTCAAGTGTCAATTTCCATGTGACTGAAACCTTACTCACACAATTCAACCTCACCAATAACAACACCTTGTATTTCAACTTTAAGGTAAACATCACAGCTAGAAATCCCAACAAGAATACCATAGTGTATTATAGGAGGATCACAGCAATTGCTTGGTACAAAGATAATGATTTTGCTTATGTGAGCTTAACACCCTTTGATCAAGGCAAAAAGAATACAAGTTTTCTTCAAACCGCGGTGTTTGAAGGGTCGAGTGTAATTAAGCTTAAACATCGCCAACTGGCTGAGTACTACATCGAGACTCGTGCCGGAGTTTACAATGACTTGACTATTGATTTGGATATGAGAGTAAGATATAAGTATGGGAGTATCAAGAGCACTCGTTTCAATCCTCCCATTGTGCAGTGTCGTTTGAGAGTTCCTTTGATTTCTAATGGTACATCAATTTCTTCTTTCAATGATACAAAATGCAGCAATAGTTACTTCTTTGTAGATCGTGATGCAGGAGATTGA 600 0.3783 MSWRSYCICFTICTLITILPVIFIEIFSPSSVNFHVTETLLTQFNLTNNNTLYFNFKVNITARNPNKNTIVYYRRITAIAWYKDNDFAYVSLTPFDQGKKNTSFLQTAVFEGSSVIKLKHRQLAEYYIETRAGVYNDLTIDLDMRVRYKYGSIKSTRFNPPIVQCRLRVPLISNGTSISSFNDTKCSNSYFFVDRDAGD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0481 199 PANTHER HARPIN-INDUCED 1 12 191 - -
Lal25g0481 199 Pfam Late embryogenesis abundant protein 59 157 IPR004864 -
Lal25g0481 199 PANTHER OS05G0367900 PROTEIN 12 191 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0481 Lal-Chr25 3345391 3345990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0481 32 171 SNARE and Associated Proteins AT1G32270 29.078 7.68e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0481 - - gmx:100784278 238.81