Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0478 ATGGAATCTAAGAACAACACTAGTAATGAAAAGAACCACCACCAACATCATCAAGAAGAAGAAGAAAACAATGAGATTTTCAAGAGAAGAATCTCTAATCACCCTCTCTATGGGCTTCTTGTTGAAACTCACTTGGACTGTTTGAAGGTTGGTGACATTTCCAACTTGGATAGTGTGCTGAAGATAGATCATCAAATGCAAACAATGAATAACCAAAACTTGGGAATGTTCAGCCACTCTGAGCTTGATCTCTTCATGGAAGCATATTGCATGGCACTTGGTCAACTTAAAGAAGCAATGGAGGAACCACAACAGAAGTCCATGGCTTTCATAAACAACATGCATTCACAACTTAGGGATCTTACTAGGCCAACCATGCTTGCACCTGATGAATCTGCAGCTGATGCTACTTCTTCTAGTGAGTGCAAATCAAGATGA 438 0.3995 MESKNNTSNEKNHHQHHQEEEENNEIFKRRISNHPLYGLLVETHLDCLKVGDISNLDSVLKIDHQMQTMNNQNLGMFSHSELDLFMEAYCMALGQLKEAMEEPQQKSMAFINNMHSQLRDLTRPTMLAPDESAADATSSSECKSR 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0478 145 MobiDBLite consensus disorder prediction 1 24 - -
Lal25g0478 145 SMART KNOX1_2 25 65 IPR005540 GO:0003677|GO:0005634
Lal25g0478 145 SMART KNOX2_2 72 123 IPR005541 GO:0003677|GO:0005634
Lal25g0478 145 Pfam KNOX2 domain 80 122 IPR005541 GO:0003677|GO:0005634
Lal25g0478 145 Pfam KNOX1 domain 28 51 IPR005540 GO:0003677|GO:0005634
Lal25g0478 145 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 119 - -
Lal25g0478 145 PANTHER FUSED COMPOUND LEAF 1 7 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0478 Lal-Chr25 3297701 3302067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0478 25 118 Homeobox Transcription Factor Family AT4G08150 34.343 1.01e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0478 - - gmx:100805160 184.111