Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0475 ATGGGTGGTGGAGGTACACTCGTAGATGGAATTCGTCGCTTCTTCAATCGTCGCAATTCAGCTCCTTCTCTTAACAATCTTGATCATCATCCCAATGATCATCATGAACAAAACAACAACAATGATGATGATGATAACAATAACCTTGTCTTTCTGAATGATTTACACCAAACTGATCATCATTACTCTGATTTTTCTTCCTTCAATTTGAAGCCCCTCAAAGTCCCAATACATTCCCATTCCAAACAAAAAGTTTCTAACATGGATCATAAAAAAAAGCCGGGTGCGCCAGAAGCAGAGTTTTTCACTGAGTATGGAGAGGCAAACCAGTATCAGATCCTGGAAATCATTGGAAAAGGAAGTTATGGCATTGTGGGTTCTTCCATTGACACTCAAACTGGAGAAAAAGTTGCGATTAAGAAAATTAATGATGTTTTTGAGCATGTATCGGATGCTACTAGGATCTTAAGAGAAATTAAACTCCTTCGGTTGCTCAAACATCCTGATATAGTAGAAATTAAGCATATAATGCTTCCTCCTTCAAGAAGAGAGTTCAAGGATGTCTATGTTGTGTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATTAAGGCAAATGATGATCTTACTCCTGAGCACTACCAATTTTTCTTGTACCAAGTTCTACGGGGCTTGAAATTTATACATACAGCAAATGTGTTTCACCGTGACCTGAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAACTGAAGATATGTGACTTTGGACTTGCTCGAGTTTCATTTAATGAAGCTCCGTCAGCTATATTCTGGACTGACTATGTTGCTACTCGGTGGTATCGTGCGCCTGAACTATGTGGATCTTTTTTCTCAAAATATACCCCCGGAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTAACTGGGAAGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGACCTCATGACTGATTTGCTTGGTACTCCTCCCGATGAATCCATTTCGAGGATTCGGAATGAGAAAGCTAGAAGGTATCTTAGTAGCATGAGAAAAAAGCAAGCAGTTCCATTATCCAAAAAATTTCCTAATGCAGACCCGCTGGCTCTTAATTTGCTGCAGCGCTTAATTGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCATTAGCTGATCCTTACTTCCATGGTTTGTCGAATGTGGATCGTGAACCATCTACTCAACCCATTTCAAAACTGGAGTTTGAGTTTGAGAAAAGGAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCTCAAATGCTTGAGGAATATCTTCGCGGGGGAGATCTAACAACAAGTTTCATGTATCCGAGTGGGGTTGATCGGTTCAAGCAACAGTTTGCACATCTTGAGGAGCATAATGCCAACGGTGAACGAAGCACTCCATTGCAGAGACAACATGTCTCCTTACCTAGAGAGCGAGTCGCTACCCCCAAGGATGGAAATAATCAAAACAATGGATCAAATCTTCAGAGTCCTCCAGGGTCTGATGTGACAAATTCTGGAAACTCGGATTCACGTAACCTATTGAAGAGTGCCAGCATTACTTCAAAATGCATAGGTCTCAAACAAAGTAAAGAACCTGAGGAAGAGCCAATTACTGAGGCCAGTAATAATGAGACAGTGGATGAGTTGACAGAGAAGGTTGCTGCACTCAATGCTTATTTCAACCATGATTCATAA 1770 0.4028 MGGGGTLVDGIRRFFNRRNSAPSLNNLDHHPNDHHEQNNNNDDDDNNNLVFLNDLHQTDHHYSDFSSFNLKPLKVPIHSHSKQKVSNMDHKKKPGAPEAEFFTEYGEANQYQILEIIGKGSYGIVGSSIDTQTGEKVAIKKINDVFEHVSDATRILREIKLLRLLKHPDIVEIKHIMLPPSRREFKDVYVVFELMESDLHQVIKANDDLTPEHYQFFLYQVLRGLKFIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPDESISRIRNEKARRYLSSMRKKQAVPLSKKFPNADPLALNLLQRLIAFDPKDRPTAEEALADPYFHGLSNVDREPSTQPISKLEFEFEKRKLTKDDVRELIYREILEYHPQMLEEYLRGGDLTTSFMYPSGVDRFKQQFAHLEEHNANGERSTPLQRQHVSLPRERVATPKDGNNQNNGSNLQSPPGSDVTNSGNSDSRNLLKSASITSKCIGLKQSKEPEEEPITEASNNETVDELTEKVAALNAYFNHDS 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0475 589 Pfam Protein kinase domain 111 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0475 589 ProSitePatterns MAP kinase signature. 146 249 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lal25g0475 589 Gene3D Transferase(Phosphotransferase) domain 1 197 425 - -
Lal25g0475 589 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 71 534 - -
Lal25g0475 589 SMART serkin_6 111 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0475 589 ProSiteProfiles Protein kinase domain profile. 111 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0475 589 SUPERFAMILY Protein kinase-like (PK-like) 105 407 IPR011009 -
Lal25g0475 589 ProSitePatterns Protein kinases ATP-binding region signature. 117 141 IPR017441 GO:0005524
Lal25g0475 589 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 71 534 - -
Lal25g0475 589 Gene3D Phosphorylase Kinase; domain 1 128 448 - -
Lal25g0475 589 CDD STKc_TDY_MAPK 110 447 - -
Lal25g0475 589 MobiDBLite consensus disorder prediction 20 48 - -
Lal25g0475 589 MobiDBLite consensus disorder prediction 483 537 - -
Lal25g0475 589 MobiDBLite consensus disorder prediction 549 573 - -
Lal25g0475 589 MobiDBLite consensus disorder prediction 28 42 - -
Lal25g0475 589 MobiDBLite consensus disorder prediction 507 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0475 Lal-Chr25 3273340 3278936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0475 1 582 MAP Kinase Gene Family AT1G73670 67.934 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal25g0475 Pkinase 7.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0475 - - gmx:100780831 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0957 10 16885839 16891625 Lal25g0475 25 3273340 3278936 ECH
Lal25g0475 25 3273340 3278936 Lal25g0475 25 3273340 3278936 ECH