Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0463 ATGATCCTTCAAATCTTCATCCATTACTATAAACATCAACCATACAATATAACCATTGTCTTATTCTTTCTCTTATTCATAGCTACCATTGTTCAATCTGATAATGCTAAATATAAGGCATGCACACCTCAAAGTTGTGGTAATGGCCCAACCATAAGATACCCCTTTTGGATTCCTTATCAACAAGAACCTTTTTGTGGCTATCCTAACTTTGAGATCACTTTTACTGTGACCAATATTGATGTCTATGAAGAAAAGTGCCCTGCTCCTATGTATAACTATACCCTTGATCACTCTCCATTTACCTTTGGTTCTGAGAATTCAAATATCTCTTTCTTCTACAACTGTACAACAGAACCTATAGATTATCCCACATATGATTTAGACTGTACTGAAAATGCTACACATTATTCATTTGCTGTTTTTCATAAGGAGGCATTGGAGCATAAAAACTACTCCTTGAATGAGTGTCAGTTTATGGTTAATGTGCCATTGAACATGAATGCTACTGTTAATTTCACAAGTTTGTTGAGAATGAATTACATTGAGATTTTGAAGATGGGGTTTCTTTTGAACTGGATTGCACCTGATTGCCAGTATTGTGAGAAAAGTGGTGGAAGGTGTGGATTTGATGGTGATATGTTCCTCTGCTTCTGCAAGGATAAGTCTTACCTTAAAAGTTGTGGACATGGCAATTCATTGAATTTGAAAAGGAAAGTTGCTATAGGTGTTGGTGCTGCTGTGTTTGGAATATTTGTATTGATTATAGCCATTTATTTCTATCAACTCCGAAAGAAGAATGATTACACTGAGTCACATGTACAATCTCAGAGTTTCACTACTTCCGATCCATCTTTAGTAAAAGGCCCTGAGAATAAGGGAAGTCAATACTTCGGAGTCCACGTTTTCACCTATGACGAACTTGAAGAGGCCACAAACAACTTCGACACGACCACAGAATTAGGAGATGGGGGCTTTGGGACAGTGTATTATGGCCAACTGCGTGATGGGCGTTGTGTTGCAGTTAAGAGGTTGTATGAGAACAATTACAGGAGAGTTGCGCAATTCATGAATGAAGTTGAGATCTTAACTCGCCTTCACCATCCGAATCTCGTGTCTCTATTTGGCTGCACTTCTCGCCGCAGCCGTGAACTTCTTCTTGTATATGAATACATTTCTAATGGAACAGTTGCTGATCATCTTCATGGTAAAAAAAACAAACCTGGTGCTGCACTACCCTGGCATATTAGAATGAACATTGCTGTTGATACTGCAAGTGCATTGAAATATCTTCATGCTTCTGACATTATCCACAGAGATGTGAAAACCAATAATATTCTTCTTGATGATAACTTTTGCGTAAAAGTAGCCGATTTTGGTCTATCGCGCCTTTTCCCGATCCATGTTACTCATATTTCAACAGCTCCACAAGGGACTCCAGGTTATGTGGATCCTGAGTACCATGAGTGTTACCAACTTAGTAATAAAAGTGATGTGTATAGCTTTGGAGTGGTGTTGATTGAACTTATATCATCCTTGCCTGCTGTTGATATCACAAGGCATAGGCATGAAATCAATTTGTCACACATGGCTATGAACAAGATTCAAAATCAAGCACTGCATGAACTTGTGGATCCAGTACTTGGGTTTGAATCAGATTTCAAGGTAAGGAAGATGGTAAATGCTGTATCTGAGTTAGCATTTAGGTGCTTGCAGAGTTCCAAAGATATGAGACCTTCTATGGAAGAAGTGGTGGAAACTCTCTTGGATATACAAAGTTATGGCAACCAACCTGAGGTATTGGATATCTCAGAAAATGATGTTGTTGTGTTGCTCAAGGATGATCCACCACCTCTATCACCTGATTCGAATGCGGCGAGCAAATCGACAACACCAAATGCTAGTGGATAA 1911 0.3888 MILQIFIHYYKHQPYNITIVLFFLLFIATIVQSDNAKYKACTPQSCGNGPTIRYPFWIPYQQEPFCGYPNFEITFTVTNIDVYEEKCPAPMYNYTLDHSPFTFGSENSNISFFYNCTTEPIDYPTYDLDCTENATHYSFAVFHKEALEHKNYSLNECQFMVNVPLNMNATVNFTSLLRMNYIEILKMGFLLNWIAPDCQYCEKSGGRCGFDGDMFLCFCKDKSYLKSCGHGNSLNLKRKVAIGVGAAVFGIFVLIIAIYFYQLRKKNDYTESHVQSQSFTTSDPSLVKGPENKGSQYFGVHVFTYDELEEATNNFDTTTELGDGGFGTVYYGQLRDGRCVAVKRLYENNYRRVAQFMNEVEILTRLHHPNLVSLFGCTSRRSRELLLVYEYISNGTVADHLHGKKNKPGAALPWHIRMNIAVDTASALKYLHASDIIHRDVKTNNILLDDNFCVKVADFGLSRLFPIHVTHISTAPQGTPGYVDPEYHECYQLSNKSDVYSFGVVLIELISSLPAVDITRHRHEINLSHMAMNKIQNQALHELVDPVLGFESDFKVRKMVNAVSELAFRCLQSSKDMRPSMEEVVETLLDIQSYGNQPEVLDISENDVVVLLKDDPPPLSPDSNAASKSTTPNASG 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0463 636 MobiDBLite consensus disorder prediction 622 636 - -
Lal25g0463 636 Pfam Wall-associated receptor kinase C-terminal 135 222 IPR032872 -
Lal25g0463 636 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 627 IPR044652 -
Lal25g0463 636 ProSiteProfiles Protein kinase domain profile. 315 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0463 636 SMART serkin_6 315 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal25g0463 636 MobiDBLite consensus disorder prediction 613 636 - -
Lal25g0463 636 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 17 627 - -
Lal25g0463 636 Pfam Wall-associated receptor kinase galacturonan-binding 41 74 IPR025287 GO:0030247
Lal25g0463 636 Gene3D Phosphorylase Kinase; domain 1 288 391 - -
Lal25g0463 636 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Lal25g0463 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Lal25g0463 636 SUPERFAMILY Protein kinase-like (PK-like) 294 593 IPR011009 -
Lal25g0463 636 Pfam Protein tyrosine and serine/threonine kinase 318 588 IPR001245 GO:0004672|GO:0006468
Lal25g0463 636 Gene3D Transferase(Phosphotransferase) domain 1 392 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0463 Lal-Chr25 3176514 3180411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0463 197 636 Receptor kinase-like Gene Family AT1G25390 53.392 6.86e-153 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal25g0463 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0463 - - mtr:MTR_6g083020 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0463 25 3176514 3180411 Lal25g0463 25 3176514 3180411 ECH