Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0459 ATGTACACATCAAGGAAGAAAATCCACAAGGATAAGGATGCCGAGCCAACTGAATTTGAAGAGTCTGTTGGACAGGCATTGTTTGATCTTGAAAACACCAACTCTGATTTGAAAAGTGATCTGAAAGATTTATACATCAATTCAGCAGTCCAAGTTGATGTTTCTGGGAACCGCAAGGCTGTAGTTATCCATGTTCCCTACAGATTAAGGAAAGGTTTCAGGAAGATTCATGTCAAGCTTGTTAGAGAGCTTGAGAAGAAATTTAGTGGGAAGGATGTCATTGTTATTGCCACCCGGAGAATAGTAAGGCCCCCAAAAAAAGGCTCTGCTGTTCAGCGTCCCCGCAGTCGTACACTCACTGCTGTGCATGAGGCAATTCTAGAGGATGTTGTATTGCCTGCTGAGATTGTTGGGAAGCGTACTAGGTATCGTCTTGATGGATCCAAGATTACGAAGGTATTCTTGGACCCAAAGGAGCGAAACAACACTGAGTACAAGTTGGAGACTTTTTCTGCAGTATACAGGAAACTTTCAGGCAAAGATGTAGTGTTTGAGTATCCTATCACAGAGGCTTAG 576 0.4288 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNSDLKSDLKDLYINSAVQVDVSGNRKAVVIHVPYRLRKGFRKIHVKLVRELEKKFSGKDVIVIATRRIVRPPKKGSAVQRPRSRTLTAVHEAILEDVVLPAEIVGKRTRYRLDGSKITKVFLDPKERNNTEYKLETFSAVYRKLSGKDVVFEYPITEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0459 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lal25g0459 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lal25g0459 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Lal25g0459 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0459 Lal-Chr25 3156923 3159355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0459 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 79.058 7.61e-114 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0459 K02993 - gmx:100527642 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0975 10 17029830 17032320 Lal25g0459 25 3156923 3159355 ECH
Lal25g0459 25 3156923 3159355 Lal25g0459 25 3156923 3159355 ECH