Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0452 ATGGCCCATGATTTCCTTGATTTGCACACACTTGGGATATTGAGTCACTCTCAACCAAATGGTTTAGCAGTACCAGATGCTAGTATGTACCCAGTAAAATCAACTTCTGATGTGATGAAGCTTATGGACATTGGGCTAAAAAATAGAGCCAAAGGTTCCACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTTGTCTCAATACATGTTAGAGGGTTAGATAACAAAGCTGGTACATCTCTTCAAGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATAGGTCTGAAGTAATTGGTGATAGGCTTAAGGAAGCACAGCATATTAACAAATCATTATCTGCACTTGGAGATGTTATTTTTGCACTTGCTCAAAAGAGTGCTCATGTACCATATAGAAACAGCAAGCTTACTCAACTTCTTCAAACTTCTCTTGGTGGTCAAGCAAAGACACTGATGTTAGTCCAAATTAACTCAGAACTAAAGTCATTCTCTGAATCTGTGAGTACTTTGAAGTTTGCTGAGAGAGTTTCTGGAGTTGAGTTAGGAGCTGCACGAAGTACCAAAGCTGGCACAGATGTTAAAGATTTAATGGAACAGATTGCTACTCTCAAGGATGAAATAGTGATAAAAGATGGGGAGATAGAACAGCTACAATTACTCAAGAGATCTTAA 687 0.3886 MAHDFLDLHTLGILSHSQPNGLAVPDASMYPVKSTSDVMKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVRGLDNKAGTSLQGNLHLVDLAGSERVDRSEVIGDRLKEAQHINKSLSALGDVIFALAQKSAHVPYRNSKLTQLLQTSLGGQAKTLMLVQINSELKSFSESVSTLKFAERVSGVELGAARSTKAGTDVKDLMEQIATLKDEIVIKDGEIEQLQLLKRS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0452 228 Gene3D Kinesin motor domain 3 224 IPR036961 -
Lal25g0452 228 PRINTS Kinesin heavy chain signature 54 71 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0452 228 PRINTS Kinesin heavy chain signature 85 103 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0452 228 PRINTS Kinesin heavy chain signature 134 155 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0452 228 Pfam Kinesin motor domain 13 182 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0452 228 ProSiteProfiles Kinesin motor domain profile. 1 184 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0452 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 222 IPR027417 -
Lal25g0452 228 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 226 - -
Lal25g0452 228 SMART kinesin_4 3 192 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0452 228 PANTHER KINESIN-LIKE PROTEIN KIN-14P 3 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0452 Lal-Chr25 3104257 3107983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0452 24 184 Calmodulin-binding Proteins AT5G65930 44.099 8.09e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0452 K10406 - gmx:100779403 348.977