Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0451 ATGAATCCTCTATCTGATTTCAAAAATGTTGGTGAGGTTGAAGCCAAGAATCGAATGCTTTTGGTTCAATGGTTAAATAGTGTTCTTCCTTCCTTGAACATATCAATAAATATTAGTGATGGTGAGTTAAGAGCATGCTTGAGCAATGGTACAGTTTTATGCCAGATATTGAACAAGCTAAGACCTGGCTCAGTGAATGTGGTTAATGATTTTTATCATTCTCTGCCATCACAATCAGAAAATGTTAAAAGGTTTCTGGCAGCATTGGATTTGTTGGGCTTGCCCAAGTTTGAAATTTCAGACCTAGAGAAGGGAAATATGAAATCTGTTGTGGATTGTCTTTTAACACTAAGAGCAAAAAGTTTACAGAATGCTTTGGGGGATAATATAACTAATTCCAATGCAGTGAGACCACTTGGGAATATGTCTTCCAATGTCCATTTTACAGACCAGAGGAAGGTTTCATCCGAGACAACGTCTCAACGTGTCGTGCGTAGCCCGGTTATGCCCGAGCATGTAGGTAATAAGATCCATGATGTGTTTCAACTGAAACATGGAAGCTACTCAGATCTTCCGGAAGCGAAAATTTCAGAACTGATGAAATCAACCAACTTAGATAATGCTCCCACTCAATCACTGTTGAGTGTTGTGAATGGCATCCTGGAGGAAAGTGTTGAAAGAAGAAGTGGAGAAATACCTCAACGTGTGGCTTGCTTGTTGAGAAAAGTCATCCAGGAGATTGAGCGGCGCATATCAACTCAAGCTGAACATTTAAAAACTCAAAACAATCTTTTTAAGACTCGCGAAGACAAGTATCAATCGAGAATAAGAGTACTAGAGGTTCTTGCATCTGGAAGTAAGAAAGACAGTGAGCAGGATTTTTCTACTAGCCAACCTCAGCAGTTAAAGAATGACAAATCTAAAATGGAAGAAAATAAGACAGATGACAAAGATATTATAAGGTTGTCGAAAGAGCTTGAGGAAAAAAGCATGGAAATTTCAACATTAAAGAAAGAACTACAAAATGAGAAGACTAAAATGGAACAGAAGATGGCAAATGACATAGATGTTATTAAGTTGGTGAAAAGGCTAGAGGACAAAAATACAGAAATTTCAACATTGAAGCAAGAGCTACAAATTGCGAAGACTAAAATGGAAGAAAACAAGGCAGACGACAAAGATGTTATAAGATTGATGAAGGAACTGGAGGAAAAACACATGGAAATTTCAACATTGAAGCAAGAACTAAAGACTGAGAAGACAAAAATGGAACAAAAGATGGCAAATGACATAGATGTTATTAAGTTGGTGAAAGGGCTAGAGGACAAAAATACAGAAATTTCAACATTGAAGCATGAACTGCAGATTGCGAAAACTAAAATGGAAGAAAAGAAGGCAAATGAAAAAGATGTTACTAGGCTGATGAAAGAGATGGAGGACAAAAATGAGCAAATTTCAACATTGAAGCAAGAACTACAGGTGGAGAAGACTAAAATGGAAGAAAATAAGGGAAATGCAAAAAATGTCAATAGGTTGACGAATGAGTTGAATGAGAAAAATATGGAAAATTTAACATTGAAGCACGAACTACAGGTGGCGAAGACTAAAATGGACGGAAAGAAGGGAAATGAAGAAGATGTCAACAGGTTGACGAAAGAGTTGGATGACAAAAATATGGAAATTTTAACATTGAAGCAAGAACTACAAGTGACGAAGACTAAAGTAGACGAAAAGAAGGGAAACAAAGAAGATGTCAATAGGTTGACGAAAGAGTTGGATGACAAAAATATGGAAATTTTAACATTGAAGCAAGAACTACAGGTAGCGATGACTAAAATAGACGAAAAGAAGGGAAACGAAGAAGATGTCAATAGGTTGACGAAAGAGTTGGATGACAAAAATATGGAAATTTTAACATTAAAGCAAGAACTACAGACTGTGAAGACCAAAGAAAAGAAGGCAGATGACAAAAATGTTGTTAGGTTGATGAAAGAGCTAGTGGACAAAGGTACAGAAATTTCAACATTGAAGCAAGAACTAGAAACATTGAACAAGACATATAAAGTACAATGCTCACAGTTGGAAGCAAAAGCTAATGGTGCCAAAGTAGAATTGGAACAAAAGTCACAAGAATATGAGCATATGTTGGAAAAGTTAAGTAAGAAGATTAAAGAAAATGAGTCAATGTTTCAGAAGTGGAACATTGAAAAGAATAAGTTGCAAAAAGCATTGACTTTTCAGTTTGGTTCAATACAGGAATTGAGACTGTCTTGGCAATCTATCAAGCAAGATGTTAAAAAAGAGCAAATGATGTATGCAGAAGAATGTAACCGATTAGGTGTAAATCTTAAACCAGTAGTTGATACAGCTGAGAGTTATCAAGAAGTTCTTGCAGAAAATCGAAAACTATTTAATGAAGTTCAAGATTTAAAAGGAAACATAAGAGTTTATTGTAGAGTAAGACCATTTATCCCTGGACAAAAGGAAAAACAGACTATTGTGGAACACCTTGGTGAAACTGAGTTAGTTGTGGCAAATCCATCCAAACAAGGGAAAGAAGCCCTAAGATCATTTAAGTTTAACAAGGTCTTTGGTCCTGCCTCAACTCAAGCTGAGGTATATGCTGATATCCAAGGCTTTATAAGATCAGTACTTGATGGATTTAATGTATGTATATTTGCTTATGGCCAAACTGGTTCAGGGAAAACTTACACAATGAGTGGTCCAAATGGTGCAACAAATGAGAGTCTTGGAGTTAACTATAGAGCTTTGAATGACCTTTTCAGCATATCCACAACCAGAAAAAACTCCATAGTTTATGATATTGGTGTTCAAATAATTGAGATATATAATGATCAAGTGCGTGATTTGTTATCAGTTGAAGCTTCTCCAAAAAAATATCCTTTTTTTTCTATTGCAATTGATGGTCTATTCTTTTCATGA 2943 0.3578 MNPLSDFKNVGEVEAKNRMLLVQWLNSVLPSLNISINISDGELRACLSNGTVLCQILNKLRPGSVNVVNDFYHSLPSQSENVKRFLAALDLLGLPKFEISDLEKGNMKSVVDCLLTLRAKSLQNALGDNITNSNAVRPLGNMSSNVHFTDQRKVSSETTSQRVVRSPVMPEHVGNKIHDVFQLKHGSYSDLPEAKISELMKSTNLDNAPTQSLLSVVNGILEESVERRSGEIPQRVACLLRKVIQEIERRISTQAEHLKTQNNLFKTREDKYQSRIRVLEVLASGSKKDSEQDFSTSQPQQLKNDKSKMEENKTDDKDIIRLSKELEEKSMEISTLKKELQNEKTKMEQKMANDIDVIKLVKRLEDKNTEISTLKQELQIAKTKMEENKADDKDVIRLMKELEEKHMEISTLKQELKTEKTKMEQKMANDIDVIKLVKGLEDKNTEISTLKHELQIAKTKMEEKKANEKDVTRLMKEMEDKNEQISTLKQELQVEKTKMEENKGNAKNVNRLTNELNEKNMENLTLKHELQVAKTKMDGKKGNEEDVNRLTKELDDKNMEILTLKQELQVTKTKVDEKKGNKEDVNRLTKELDDKNMEILTLKQELQVAMTKIDEKKGNEEDVNRLTKELDDKNMEILTLKQELQTVKTKEKKADDKNVVRLMKELVDKGTEISTLKQELETLNKTYKVQCSQLEAKANGAKVELEQKSQEYEHMLEKLSKKIKENESMFQKWNIEKNKLQKALTFQFGSIQELRLSWQSIKQDVKKEQMMYAEECNRLGVNLKPVVDTAESYQEVLAENRKLFNEVQDLKGNIRVYCRVRPFIPGQKEKQTIVEHLGETELVVANPSKQGKEALRSFKFNKVFGPASTQAEVYADIQGFIRSVLDGFNVCIFAYGQTGSGKTYTMSGPNGATNESLGVNYRALNDLFSISTTRKNSIVYDIGVQIIEIYNDQVRDLLSVEASPKKYPFFSIAIDGLFFS 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0451 980 Coils Coil 793 813 - -
Lal25g0451 980 SMART kinesin_4 811 976 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0451 980 Coils Coil 319 391 - -
Lal25g0451 980 ProSiteProfiles Calponin homology (CH) domain profile. 15 122 IPR001715 GO:0005515
Lal25g0451 980 Gene3D - 468 503 - -
Lal25g0451 980 Gene3D - 355 390 - -
Lal25g0451 980 Gene3D - 543 579 - -
Lal25g0451 980 Gene3D - 391 430 - -
Lal25g0451 980 Gene3D - 655 695 - -
Lal25g0451 980 Gene3D - 314 354 - -
Lal25g0451 980 Gene3D - 580 617 - -
Lal25g0451 980 Gene3D - 431 467 - -
Lal25g0451 980 Gene3D - 619 654 - -
Lal25g0451 980 Gene3D - 504 541 - -
Lal25g0451 980 Coils Coil 540 567 - -
Lal25g0451 980 ProSiteProfiles Kinesin motor domain profile. 813 980 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal25g0451 980 SUPERFAMILY Calponin-homology domain, CH-domain 18 124 IPR036872 -
Lal25g0451 980 MobiDBLite consensus disorder prediction 288 303 - -
Lal25g0451 980 Gene3D - 8 123 IPR036872 -
Lal25g0451 980 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 788 967 IPR027417 -
Lal25g0451 980 SMART ch_5 17 120 IPR001715 GO:0005515
Lal25g0451 980 Coils Coil 395 429 - -
Lal25g0451 980 Gene3D Kinesin motor domain 755 973 IPR036961 -
Lal25g0451 980 Coils Coil 616 650 - -
Lal25g0451 980 Pfam Calponin homology (CH) domain 18 118 IPR001715 GO:0005515
Lal25g0451 980 PANTHER KINESIN-LIKE PROTEIN KLP-3 640 963 - -
Lal25g0451 980 PANTHER KINESIN-LIKE PROTEIN KLP-3 11 507 - -
Lal25g0451 980 MobiDBLite consensus disorder prediction 287 317 - -
Lal25g0451 980 Coils Coil 440 529 - -
Lal25g0451 980 Coils Coil 677 736 - -
Lal25g0451 980 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 11 507 - -
Lal25g0451 980 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 640 963 - -
Lal25g0451 980 Pfam Microtubule binding 798 958 IPR031852 GO:0008017
Lal25g0451 980 CDD CH 21 122 IPR001715 GO:0005515
Lal25g0451 980 Coils Coil 578 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0451 Lal-Chr25 3098080 3103820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0451 538 958 Calmodulin-binding Proteins AT5G65930 28.506 1.50e-27 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0451 K10406 - csv:101213894 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0989 15 7906324 7918766 Lal25g0451 25 3098080 3103820 PCT
Lal25g0451 25 3098080 3103820 Lal15g0989 15 7906324 7918766 PCT